EST | mRNA | Note | |
---|---|---|---|
NCBI | 76,566 | 86 | available from NCBI as of 25 Dec 2008 |
Cleaned | 76,482 | 86 | elimination of vector and E. coli sequence by cross_match |
Total | 76,568 | for assembling |
Contig | Singlet | Total |
---|---|---|
11,422 | 18,214 | 29,636 |
Subject | Hits | No hits | Entries in subject | Version |
---|---|---|---|---|
NCBI nr | 24,460 | 5,176 | 576,441 | |
Ricinus communis protein | 23,968 | 5,668 | 31,221 | Phytozome v.8.0 |
Populus trichocarpa protein | 23,913 | 5,723 | 45,033 | Phytozome v.8.0 |
Vitis vinifera protein | 22,796 | 6,840 | 26,346 | Phytozome v.8.0 |
Arabidopsis thaliana protein | 22,685 | 6,951 | 35,386 | TAIR10 |
Subject | Mapped | Unmapped | Entries in subject | Version |
---|---|---|---|---|
Manihot esculenta | 27,692 | 1,944 | 12,977 | Phytozome ver.8.0 |
Ricinus communis | 21,213 | 8,243 | 25,828 | Phytozome ver.8.0 |
Populus trichocarpa | 18,706 | 10,930 | 2,518 | Phytozome ver.8.0 |
Vitis vinifera | 13,733 | 15,903 | 33 | Phytozome ver.8.0 |
Arabidopsis thaliana | 6,983 | 22,653 | 7 | TAIR10 |