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Source sequences of cassava transcript

	EST	mRNA	Note
NCBI	76,566	86	available from NCBI as of 25 Dec 2008
Cleaned	76,482	86	elimination of vector and E. coli sequence by cross_match
Total		76,568	for assembling

Assembly

Contig	Singlet	Total
11,422	18,214	29,636

Assignment to protein sequences

Subject	Hits	No hits	Entries in subject	Version
NCBI nr	24,460	5,176	576,441
Ricinus communis protein	23,968	5,668	31,221	Phytozome v.8.0
Populus trichocarpa protein	23,913	5,723	45,033	Phytozome v.8.0
Vitis vinifera protein	22,796	6,840	26,346	Phytozome v.8.0
Arabidopsis thaliana protein	22,685	6,951	35,386	TAIR10

Mapping to plant genome

Subject	Mapped	Unmapped	Entries in subject	Version
Manihot esculenta	27,692	1,944	12,977	Phytozome ver.8.0
Ricinus communis	21,213	8,243	25,828	Phytozome ver.8.0
Populus trichocarpa	18,706	10,930	2,518	Phytozome ver.8.0
Vitis vinifera	13,733	15,903	33	Phytozome ver.8.0
Arabidopsis thaliana	6,983	22,653	7	TAIR10