Sequence ID | FF536789 | |
Sequence Length | 713 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | Mapped | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_021498 (FF536789) |
>FF536789 GATTGCATCTGTTATCAATGCGGAGTGGAGGTGACCGACTGAGACTGTTCAAAGCTGATTTGCAGGAAGAAGGCAGCTTT GATGAGGCATGTTGCAGCTTCAATGGAATTCAACGTCACTGAAAACGCCAACGTTGAGAACTATGTCCAGACAAATGTCA TTGATCCTGCAATCAAAGGAACTCTAAACCTCCTCAACTCTTGCTTGAAGTCCAAATCTGTTAAAAGGGTTGTTTTCACA TCATCAATCAGTACTCTAACAGCTAAAGACAGCTCTGGAAAATGGAGAGATGTAGTTGACGAAACTTGCCAGATTCCTGT TGATTATGTCTGGAATGCAAAAGCAACTGGATGGGTTTATGCACTCTCCAAGCTTCTCACAGAGGAAGCAGCATTCCAGT ATGCAAACCACAATGGCATTGATCTTGTTTCAGTAATAACAGCAACTGTTGCTGGTCCATTCCTCACCCCAAGTGTCCCT TCAAGCATTCAAGTTCTCTTATCTCCATTGACAGGTGATTCCAAGTATTTTTCAATACTATCAGCAGTTAATGCTCGAAT GGGTTCAATAGCATTAGTCCACATTGAAGATATATGTAATGCACATATATATCTAATGGAGAACAAGACAGCAAAAGGGA GATACCTATGCTGTTCTCAGAGTTATCTGATGTCTGAGTTAGTTGATCATCTTGCAGAAGAGTATCCTTGCTC |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002522817.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gb|EEF39515.1| cinnamoyl-CoA reductase, putative [Ricinus communis] | 326 | 1e-96 |
Manihot esculenta | blastn | cassava4.1_016097m|PACid:17961623 | 698 | 0.0 |
FGENESH CDS | blastn | scaffold06675_FGENESH4 5 exon (s) 17670 - 19712 711 bp, chain - | 698 | 0.0 |
Arabidopsis thaliana | blastx | AT4G27250.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr4:13642803-13644425 REVERSE LENGTH=354 | 276 | 2e-78 |
Populus trichocarpa | blastx | POPTR_0001s44120.1|PACid:18236376 | 319 | 5e-95 |
Vitis vinifera | blastx | GSVIVT01014573001|PACid:17825531 | 321 | 5e-95 |
Ricinus communis | blastx | 28166.m001043|PACid:16800134 | 326 | 4e-99 |
InterProScan |
GO:0003824
Molecular Function catalytic activity |
GO:0005488
Molecular Function binding |
GO:0008152
Biological Process metabolic process |
Sequence: FF536789_1_ORF2 Length: 224 aa | |||||||||||||
InterPro IPR001509 Family |
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InterPro IPR016040 Domain |
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noIPR unintegrated |
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Sequence: FF536789_4_ORF2 Length: 57 aa | |
No hits reported. |
Sequence: FF536789_5_ORF1 Length: 54 aa | |||||||
noIPR unintegrated |
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Sequence: FF536789_6_ORF2 Length: 55 aa | |
No hits reported. |
Sequence: FF536789_6_ORF3 Length: 60 aa | |||||||
noIPR unintegrated |
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