Summary
| Sequence ID | FF535701 | |
| Sequence Length | 483 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | Mapped | |
| Gbrowse Ptr | Mapped | |
| Gbrowse Vvi | Mapped | |
| Gbrowse Ath | Mapped | |
| Corresponding scaffold | - | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_021142 (FF535701) |
| >FF535701 GGATGGCAGCACAAGTCTTCCAACCTAGCCACAGGGTGCCAACCATGAGTATAGAAGAAGCTGGGTTAAGGGAGATGGAG ATTATGAATAAATGGCAAGAGAGAAATGCTAAAATCATGGCAGAAGCAAACTCTTCATGGTACAAAGACTATCGGAAGGT ACAAACAGGGGAAGATGATGAAGAAGATGATGATGCTGTGGTACAGAAGGAAAGGGCATGGGATGACTGGAAAGATGATA ATCCTCGGGGTGCTGGTAATAAGAAGCTCACACCTTGTGGTTAATGGTTGAATATGTTTTCTGTTTTTGTGATGTAGCAT ATCAAACATAATTAAAACTGATTTTTTATATTGATGAATTTCTTGCTTCTGATTGGTTCTACAAATTTTTGGTTGAATCT GTGTATTCCAGTGAAACATTGATCTCTGAACAGTTGATACTGTGAATTGTTTTTTAGGAGAGTTGTTTCTGTTCTTGAGT TCT |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ref|XP_002277330.1| PREDICTED: hypothetical protein [Vitis vinifera] emb|CBI23016.3| unnamed protein product [Vitis vinifera] | 166 | 1e-39 |
| Manihot esculenta | blastn | cassava4.1_012216m|PACid:17981232 | 555 | 1e-157 |
| FGENESH CDS | blastn | scaffold00224_FGENESH1 8 exon (s) 8961 - 13140 1107 bp, chain + | 555 | 1e-157 |
| Arabidopsis thaliana | blastx | AT5G53000.1 | Symbols: TAP46 | 2A phosphatase associated protein of 46 kD | chr5:21485654-21487869 REVERSE LENGTH=405 | 134 | 3e-32 |
| Populus trichocarpa | blastx | POPTR_0012s02360.1|PACid:18230480 | 162 | 1e-40 |
| Vitis vinifera | blastx | GSVIVT01038559001|PACid:17842795 | 166 | 5e-42 |
| Ricinus communis | blastx | 29475.m000231|PACid:16802916 | 118 | 1e-27 |
| InterProScan |
| GO:0009607
Biological Process response to biotic stimulus |
| GO:0009966
Biological Process regulation of signal transduction |
| Sequence: FF535701_1_ORF2 Length: 67 aa | |||||||
| noIPR unintegrated |
| ||||||
![[29-36]? NA seg seg](http://pmix.psc.riken.jp/img/interpro/G.gif){kind=small}
| Sequence: FF535701_3_ORF1 Length: 93 aa | ||||||||||
| InterPro IPR007304 Family |
| |||||||||
| noIPR unintegrated |
| |||||||||
![[1-93]T 2.7e-51 PTHR10933 IMMUNOGLOBULIN-BINDING PROTEIN 1-RELATED](http://pmix.psc.riken.jp/img/interpro/X4.gif){kind=small}
![[1-81]T 1.9e-34 PF04177 TAP42](http://pmix.psc.riken.jp/img/interpro/H.gif){kind=small}
| Sequence: FF535701_4_ORF2 Length: 50 aa | |||||||
| noIPR unintegrated |
| ||||||
| Sequence: FF535701_5_ORF1 Length: 49 aa | |
| No hits reported. | |
| Sequence: FF535701_5_ORF2 Length: 49 aa | |
| No hits reported. | |
| Sequence: FF535701_6_ORF1 Length: 115 aa | |
| No hits reported. | |
