Sequence ID | DV448840 | |
Sequence Length | 254 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | - | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_017889 (DV448840) |
>DV448840 CTTTGCTGGCGATATTTGGAGCTTTGGGGTAAGCACATTGGAGTTTTTTCTAGGGAGGTTTCCGTTTGCAGTTGGGCGGC AGGNNNNTTGGGCAAGCTTCGATTTGTGCCATTTGTATGTCGCAACCACCTGAGGCTCCGCCTACCGCTTCCAGAGACTT TCGGGAATTTATTGCTTTGTCTGCAAAGAGAGCCGGCGCCAAGGTGGACTCCCAATCAGTTGTTACNNCATCCCTTTATA ACAAGGAACAATGG |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | dbj|BAC81698.1| mitogen-activated protein kinase kinase [Solanum tuberosum] | 62.0 | 3e-15 |
Manihot esculenta | blastn | cassava4.1_010555m|PACid:17966997 | 402 | 1e-112 |
FGENESH CDS | blastn | scaffold09974_FGENESH2 1 exon (s) 15098 - 16171 1074 bp, chain - | 402 | 1e-112 |
Arabidopsis thaliana | blastx | AT3G21220.1 | Symbols: ATMKK5, ATMAP2K_ALPHA, MAP2K_A, MKK5, ATMEK5, MEK5 | MAP kinase kinase 5 | chr3:7445917-7446963 FORWARD LENGTH=348 | 57.4 | 9e-14 |
Populus trichocarpa | blastx | POPTR_0008s01030.1|PACid:18248965 | 58.5 | 9e-17 |
Vitis vinifera | blastx | GSVIVT01016115001|PACid:17826627 | 60.1 | 2e-15 |
Ricinus communis | blastx | 29748.m000383|PACid:16807778 | 58.9 | 4e-15 |
InterProScan |
No hits found |
Sequence: DV448840_1_ORF1 Length: 85 aa | ||||||||||
InterPro IPR000719 Domain |
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InterPro IPR011009 Domain |
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noIPR unintegrated |
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Sequence: DV448840_3_ORF2 Length: 67 aa | |||||||||||||
InterPro IPR000719 Domain |
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noIPR unintegrated |
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Sequence: DV448840_5_ORF2 Length: 61 aa | |
No hits reported. |
Sequence: DV448840_6_ORF2 Length: 60 aa | |||||||
noIPR unintegrated |
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