Summary
| Sequence ID | DV447949 | |
| Sequence Length | 581 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | Mapped | |
| Gbrowse Ptr | Mapped | |
| Gbrowse Vvi | - | |
| Gbrowse Ath | - | |
| Corresponding scaffold | - | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_017658 (DV447949) |
| >DV447949 CGTAANNNTCGGAGATGGTAACGTGGGTACCCTCCGAGAGGTCCACGTTGTCTCTGGACTCCCTGCAGCTAATAGCACGG AGCGACTGGAGATCCTGGACGACGAACGTCATGTTATTAGCTTCAGCGTCGTTGGTGGGGATCATCGGCTTGCTAATTAC AGGTCGGTAACAACCCTCCATCCTTCTCCCGCAGGTAACGGCACCGTACTGGTGGAGTCTTACGTGGTGGATATTCCTCC CGGCAACACGAAGGAGGATACGTGTGTTTTTGTGGACACCATCGTCCGGTGCAACCTGCAGTCACTGACGCAGATCGCAG AGAACTTGGCCAGAAACAATACATCATCATCGTGAGTCATAATGTAATAAACACACACATCATCGTCTTATAGAATATGA ATTATCATATGTAGAATATCCTAGTTTTAAAAATGAGTTGGCTTTGGTTATACAGCGTCGTTTTTGTAAGCATCCGATGT GAGTCTGCCAATGAAACTTGAAACAGCTAGTGTTTTTTTTTTTTTCTTGTAATATTACTTATTATTTGTTGTCACTTTAA TTTATTTGTTTATTTTTTTTC |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ref|XP_002526675.1| conserved hypothetical protein [Ricinus communis] gb|EEF35697.1| conserved hypothetical protein [Ricinus communis] | 207 | 5e-52 |
| Manihot esculenta | blastn | cassava4.1_016054m|PACid:17964907 | 688 | 0.0 |
| FGENESH CDS | blastn | scaffold05375_FGENESH14 1 exon (s) 132225 - 132869 645 bp, chain - | 688 | 0.0 |
| Arabidopsis thaliana | blastx | AT2G38310.1 | Symbols: PYL4, RCAR10 | PYR1-like 4 | chr2:16050251-16050874 FORWARD LENGTH=207 | 181 | 2e-46 |
| Populus trichocarpa | blastx | POPTR_0006s10500.1|PACid:18213352 | 204 | 3e-53 |
| Vitis vinifera | blastx | GSVIVT01032747001|PACid:17838636 | 155 | 9e-39 |
| Ricinus communis | blastx | 29820.m001002|PACid:16809662 | 207 | 2e-54 |
| InterProScan |
| GO:0006952
Biological Process defense response |
| GO:0009607
Biological Process response to biotic stimulus |
| Sequence: DV447949_1_ORF2 Length: 64 aa | |
| No hits reported. | |
| Sequence: DV447949_2_ORF1 Length: 117 aa | ||||||||||
| InterPro IPR000916 Family |
| |||||||||
| noIPR unintegrated |
| |||||||||
![[4-103]T 6e-05 PD000531 PR13_PETCR_P19418;](http://pmix.psc.riken.jp/img/interpro/D.gif){kind=small}
![[4-58]T 0.00014 G3DSA:3.30.530.20 no description](http://pmix.psc.riken.jp/img/interpro/X2.gif){kind=small}
![[1-108]T 1.3e-23 SSF55961 Bet v1-like](http://pmix.psc.riken.jp/img/interpro/B.gif){kind=small}
| Sequence: DV447949_3_ORF1 Length: 53 aa | |
| No hits reported. | |
| Sequence: DV447949_4_ORF2 Length: 55 aa | |
| No hits reported. | |
| Sequence: DV447949_5_ORF2 Length: 52 aa | |
| No hits reported. | |
| Sequence: DV447949_5_ORF3 Length: 100 aa | |
| No hits reported. | |
| Sequence: DV447949_6_ORF2 Length: 67 aa | |
| No hits reported. | |
