Sequence ID | DV444525 | |
Sequence Length | 517 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | - | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_016778 (DV444525) |
>DV444525 GGAANNNNNTATTGTCTGCTGGAAATATTTTCATGATGGGTCTGCTNNNNNGGCTAAGGAAGTAATTGAAACCATAGATG ATGTGAATTTGTTAATCGTCTTCAAAGTGATCGAAGGAGATTTGTTGGAAGAATTTAAGAATTTCAAGGTGACCGTTCAA GTTACGCCTAAAGGAGAGGGCAGTGTGGTGCGTTGGACCTTAGAATATGAGAAGATCCATGAGAATATACCAGATCCTTA CTCCTTGCTAGAGATTATTGTCCAAAATAGTAAGGATGTTTCTGCTCATCTCGTGAAATGTCAGAACAAATGATCATGGA ACATGTTATGCTCTAATATGTGGTTTGCATAATAATTAAATAAGTGCTTTATAATGAAGCACCAATGACAATGCATCTTT GCATATAAACTTGTATCTATAGGACAATGCATCTTTGCATATGAACTTGTATCTATAATGCATATGAACTTGTATCAGTA ACGTTTTAAACCTTAAAACTATGTCTGTGTGTTTTTT |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002534267.1| Major latex protein, putative [Ricinus communis] gb|EEF28116.1| Major latex protein, putative [Ricinus communis] | 133 | 1e-29 |
Manihot esculenta | blastn | cassava4.1_018267m|PACid:17989448 | 573 | 1e-163 |
FGENESH CDS | blastn | scaffold03169_FGENESH5 2 exon (s) 34460 - 35000 420 bp, chain + | 470 | 1e-132 |
Arabidopsis thaliana | blastx | AT1G70850.3 | Symbols: MLP34 | MLP-like protein 34 | chr1:26715429-26716744 REVERSE LENGTH=316 | 107 | 3e-24 |
Populus trichocarpa | blastx | POPTR_0010s12110.1|PACid:18241894 | 120 | 6e-28 |
Vitis vinifera | blastx | GSVIVT01011719001|PACid:17823515 | 100 | 3e-22 |
Ricinus communis | blastx | 29947.m000052|PACid:16814350 | 133 | 5e-32 |
InterProScan |
GO:0006952
Biological Process defense response |
GO:0009607
Biological Process response to biotic stimulus |
Sequence: DV444525_2_ORF1 Length: 103 aa | ||||||||||
InterPro IPR000916 Family |
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noIPR unintegrated |
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Sequence: DV444525_4_ORF2 Length: 57 aa | |
No hits reported. |
Sequence: DV444525_5_ORF1 Length: 53 aa | |
No hits reported. |