Sequence ID | ||
Sequence Length | 704 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_012850 (Contig10737) |
>Contig10737 ATATATCTTTTCCAAAAGCCATATCATGGGTGTTTTAACTTTTGAGAAGGAATTGGCTACTGCAATCCCTCCGGCCAAGA TGTTCAAGGTCTTTGTCCTTGAAGGTGACACTGCCATCCCTACCATTTTGCCTGAGGTTGTTAAGAGTGTGGAGATCATT GAAGGAAATGGAGGACCTGGCACCATTAAGAAGACTACCTTTGCGGAAGGTACCCAACACAAGTATATTAAGACCAAGCT TGAAGCAGTGGACAAAGATAATTTCAAGCACAGCTACAGTGTGATTGAAGGTGAGCCATGGATGGATGCCATAGACAAAA TTTCATATGAGACACAACTAGTGGCATCTCCTGATGGAGGATCTATTATTAAGAGCATCACCAAGTACTTCCCAAAGGGA AACAGTGAAATCAATGAAGATGAAGTCAAGGCTGGAGCAGAGAAGGGCTTGGGATTGTTTAAAACCGTGGAAGCCTACCT CTTGGCAAATCCTCATGCTTATAACTAAATATCGTGTCTCAGAGTCAACAAGCGGCTATCGCCGGCCTATCCTCTTTTAC CCTTTTTTTACTTTAAAGGTCAAACTACTTTCGGCCCGACAATAAAAGTGTAGTGGTTATAGTACAATGTAATGGACTGC AATTAAGTTTTTGTTTCAATCAAACCATGGGAATGAAAAGAAATAATTTAAATCTTAAAAANNN |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002516994.1| Major allergen Pru ar, putative [Ricinus communis] gb|EEF45608.1| Major allergen Pru ar, putative [Ricinus communis] | 238 | 5e-61 |
Manihot esculenta | blastn | cassava4.1_018033m|PACid:17962226 | 942 | 0.0 |
FGENESH CDS | blastn | scaffold01551_FGENESH457 2 exon (s) 3013858 - 3014412 483 bp, chain + | 942 | 0.0 |
Arabidopsis thaliana | blastx | AT1G24020.2 | Symbols: MLP423 | MLP-like protein 423 | chr1:8500653-8501458 REVERSE LENGTH=155 | 62.8 | 2e-10 |
Populus trichocarpa | blastx | POPTR_0008s23090.1|PACid:18247791 | 187 | 5e-48 |
Vitis vinifera | blastx | GSVIVT01035071001|PACid:17840333 | 208 | 2e-54 |
Ricinus communis | blastx | 29726.m004117|PACid:16806827 | 238 | 2e-63 |
InterProScan |
GO:0006952
Biological Process defense response |
GO:0009607
Biological Process response to biotic stimulus |
Sequence: Contig10737_2_ORF1 Length: 168 aa | |||||||||||||
InterPro IPR000916 Family |
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noIPR unintegrated |
|
Sequence: Contig10737_3_ORF2 Length: 81 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig10737_3_ORF3 Length: 87 aa | |
No hits reported. |
Sequence: Contig10737_4_ORF2 Length: 66 aa | |
No hits reported. |
Sequence: Contig10737_4_ORF3 Length: 91 aa | |
No hits reported. |
Sequence: Contig10737_5_ORF2 Length: 65 aa | |
No hits reported. |
Sequence: Contig10737_5_ORF3 Length: 95 aa | |
No hits reported. |