Sequence ID		Contig05822 CAS01_014_D10.r (DB943093) CAS01_031_M06.f (DB931151) CAS01_032_M15.f (DB931532) CAS01_032_M15.r (DB948977) CAS01_044_D19.f (DB935723) CAS01_044_D19.r (DB952676) CAS01_052_H22.r (DB955309) DV447487
Sequence Length		896 nucleotides
Gbrowse Mes
Gbrowse Rco		Mapped
Gbrowse Ptr		Mapped
Gbrowse Vvi		Mapped
Gbrowse Ath		-
Transcript scaffold composed of the full-length cDNA(s)		Scaffold06981  Scaffold06982  Scaffold06983  Scaffold06984
Probe ID of RIKEN ver.1 microarray		-

>Contig05822 GCTTGGTAAATAGTAATAGTAAGTAGAAGAAAGTAAAGGGAGGTAAAAAAATGGCTTCCTCTATGCTCTCAACTGCTACT GTGGCTAGCATTAACAGGGTCAGCCCTGCTCAGGCTACTATGGTGGCTCCGTTCACCGGCCTTAAGTCCACCCCAGTCTT CCCTACCACCCGCAAAACCAACTCTGACATCACCTCCATCACCAGCAACGGTGGCAAGGTCCAATGCATGAAGGTTTGGC CAACACTTGGGATGAAGAAGTTCGAGACTCTCTCATACCTTCCACCACTTACAAGGGAGCAATTGGCCAGCGAAGTTGAA TACCTTCTTCGTTCTGGATGGATTCCTTGCTTGGAATTCGAGCTAGAGGTGATCTCAAAACAAAATCTTAAAATTTGTTA ATAATTCAACACGCAATTGCATGAGTGACTTACGTATGTGTTTGGTTTGGAAGCATGGATTGGTGTACCGTGAGCATGCA AGAGTACCAGGGTACTACGATGGTCGCTACTGGACCATGTGGAAGCTGCCCATGTTTGGGTGCACAGATGCAGCCCAGGT GTTGAAGGAGCTTGATGAGCTGATCAAACATCACCCAGATGGCTATGCTAGGATCATTGGCTTCGACAATGTTCGCCAAG TGCAGTGCATCAGTTTCCTTGCCTACAAGCCTCCTGGCGCTTAAATTATTTTCTCCCAATTTTAATTTGTTGACATTATC CTTTCTGGGTTTTGTTCAATTAGGATCGATGTTTTTGAAATGTTCTCTTTTTGCTTGTACCTTTTTTCCTTTCCTATCGG AGTTTCTCCGACTGAACGGATGCAAGATGCGAGGTTGAATTCATAAAACTGTTGAACATTTGTTGCTATCAAATATTAAA CTCGTTTGCCTTGTGC

vs DB	Program	Description	Score	E value
NCBI nr	blastx	sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carboxylase small chain, chloroplastic; Short=RuBisCO small subunit; Flags: Precursor gb|AAA99429.1| ribulose 1,5-bisphosphate carboxylase [Manihot esculenta] gb|AAF06099.1| ribulose 1,5-bisphosphate carboxylase small chain precursor [Manihot esculenta]	213	1e-97
Manihot esculenta	blastn	cassava4.1_019542m|PACid:17990748	696	0.0
FGENESH CDS	blastn	scaffold10493_FGENESH3 3 exon (s) 25373 - 26217 549 bp, chain -	630	1e-180
Arabidopsis thaliana	blastx	AT5G38410.3 | Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=186	158	4e-73
Populus trichocarpa	blastx	POPTR_0005s15660.1|PACid:18208907	163	2e-70
Vitis vinifera	blastx	GSVIVT01008288001|PACid:17820914	130	8e-60
Ricinus communis	blastx	29974.m000232|PACid:16814754	182	4e-82

InterProScan

GO:0009573 Cellular Component chloroplast ribulose bisphosphate carboxylase complex

GO:0015977 Biological Process carbon utilization by fixation of carbon dioxide

GO:0016984 Molecular Function ribulose-bisphosphate carboxylase activity

Sequence: Contig05822_1_ORF2  Length: 64 aa
noIPR unintegrated	unintegrated seg seg

Sequence: Contig05822_1_ORF3  Length: 103 aa
InterPro IPR000894 Domain	Ribulose bisphosphate carboxylase, small chain PD000290 RBS6_FLAPR_Q39748; PR00152 RUBISCOSMALL G3DSA:3.30.190.10 no description PF00101 RuBisCO_small SSF55239 RuBisCO, small subunit

Sequence: Contig05822_2_ORF2  Length: 84 aa

No hits reported.

Sequence: Contig05822_3_ORF2  Length: 124 aa
InterPro IPR000894 Domain	Ribulose bisphosphate carboxylase, small chain PD000290 Q6A159_EEEEE_Q6A159; PR00152 RUBISCOSMALL G3DSA:3.30.190.10 no description PF00101 RuBisCO_small SSF55239 RuBisCO, small subunit

Sequence: Contig05822_4_ORF2  Length: 101 aa

No hits reported.

Sequence: Contig05822_5_ORF2  Length: 61 aa
noIPR unintegrated	unintegrated seg seg

Sequence: Contig05822_5_ORF3  Length: 95 aa
noIPR unintegrated	unintegrated seg seg

Sequence: Contig05822_6_ORF2  Length: 57 aa

No hits reported.

Sequence: Contig05822_6_ORF3  Length: 67 aa

No hits reported.