Sequence ID | ||
Sequence Length | 653 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | Mapped | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold02229 Scaffold02230 Scaffold02231 Scaffold02232 Scaffold02233 Scaffold02234 | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_001710 (Scaffold02229) R_Mes01_001711 (Scaffold02230) R_Mes01_001712 (Scaffold02231) R_Mes01_001713 (Scaffold02232) R_Mes01_001714 (Scaffold02233) R_Mes01_001715 (Scaffold02234) |
>Contig01707 GAAGCTTATTACATTGCTGCTTCTCTCTATAGAACAACAGCCGCCTCTCCTCTTCTTCTCTCTGTGAATATATTGTATAG CTTTGCATTCTCTCTCTCCCTCTCTCTCACATTAGAGCCAATACACACTCATTTACTCCTTAATACAAGCAGAGTGCTCT GTTTTTCATAAGCTTCATTCAAGCTGGCGATCGAAAATCAGGAAACCACTATCAAGCCTAGAAATAGGAGAATCATGGGT GCCGGAGGACCTGAAGAAGACGACGACGACAACAGGTGGCCGAAGTGGCTAAGGCCTCTGCTAAAGGAGAGCTTCTTTGT TCAATGCAAATTGCACGCTGATTCCCATAAAAGTGAATGTAATATGTATTGTATGGATTGCATGAATGGGGCTCTCTGCT CCCTCTGCCTAGCCTACCACAAGGACCATCACGCTATTCAGATAAGGAGGTCCTCATACCATGATGTGATAAGGGTATCA GAGATACAGAAGGTGCTGGACATATCTGGTGTCCAGACTTATGTGATCAACAGTGCGAGAGTTGTTTTCTTGAATGAAAG GCCTCAGCCTAGGCCTGGCAAAGGTGTCACCAACACCTGCGATGTCTGCGAGCGAAGCCTTCTTGATTCCTTCCGTTTCT GCTCCCTTGGCTG |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002277964.1| PREDICTED: hypothetical protein [Vitis vinifera] emb|CBI33878.3| unnamed protein product [Vitis vinifera] | 293 | 2e-77 |
Manihot esculenta | blastn | cassava4.1_015881m|PACid:17968630 | 831 | 0.0 |
FGENESH CDS | blastn | scaffold08679_FGENESH2 5 exon (s) 60147 - 63059 756 bp, chain - | 827 | 0.0 |
Arabidopsis thaliana | blastx | AT4G17900.1 | Symbols: | PLATZ transcription factor family protein | chr4:9946046-9947697 FORWARD LENGTH=227 | 268 | 2e-72 |
Populus trichocarpa | blastx | POPTR_0001s02390.1|PACid:18234742 | 291 | 2e-79 |
Vitis vinifera | blastx | GSVIVT01013149001|PACid:17824483 | 293 | 6e-80 |
Ricinus communis | blastx | 30073.m002298|PACid:16816881 | 277 | 3e-75 |
InterProScan |
No hits found |
Sequence: Contig01707_1_ORF1 Length: 56 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig01707_1_ORF2 Length: 160 aa | |||||||
InterPro IPR006734 Family |
|
Sequence: Contig01707_2_ORF2 Length: 58 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig01707_4_ORF1 Length: 57 aa | |
No hits reported. |
Sequence: Contig01707_5_ORF2 Length: 66 aa | |
No hits reported. |