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Summary
Sequence ID CK901188
Sequence Length 221 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  -
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_015361 (CK901188)
 
 
Sequence
>CK901188
CTATAAGCCCTTTGTGGTCATTGTCCTGATACTGAGGTGATGAATTGTCCTCTGAAGATTGATCACTTGCATTGCCAACA
TTTGGTGCACACCTAATAGTACTCCTAGGGCTTCCATTACTAATAGCATCAGTTGCTGCAGATGGGGTTCCAACAGGGGC
TCGACTGGGAGATCTGCTTTTGGGGGGTAATTTCAAGTAACTTGGAGGAGTTTCATCACGT

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ef|XP_002319543.1| predicted protein [Populus trichocarpa] >gi|... 102 3e-20 >ref|XP_002319543.1| predicted protein [Populus trichocarpa] gb|EEE95466.1| predicted protein [Populus trichocarpa] 102 3e-20
  Manihot esculenta blastn  cassava4.1_030718m|PACid:17992876 391 1e-108
  FGENESH CDS blastn  scaffold03572_FGENESH9 17 exon (s) 117594 - 123259 2040 bp, chain - 391 1e-108
  Arabidopsis thaliana blastx  AT1G09000.1 | Symbols: ANP1, MAPKKK1, NP1 | NPK1-related protein kinase 1 | chr1:2891111-2894987 FORWARD LENGTH=666 58.2 1e-09
  Populus trichocarpa blastx  POPTR_0013s02360.1|PACid:18221893 102 9e-23
  Vitis vinifera blastx  GSVIVT01000047001|PACid:17816662 85.5 5e-18
  Ricinus communis blastx  30128.m008771|PACid:16818360 100 1e-22
 
 
Gene Ontology 
InterProScan
No hits found
 
 
InterProScan result 
Sequence: CK901188_4_ORF2  Length: 63 aa
noIPR
unintegrated
unintegrated
seg[8-25]? NA seg segseg
Sequence: CK901188_5_ORF1  Length: 73 aa
No hits reported.