Sequence ID | CK901188 | |
Sequence Length | 221 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_015361 (CK901188) |
>CK901188 CTATAAGCCCTTTGTGGTCATTGTCCTGATACTGAGGTGATGAATTGTCCTCTGAAGATTGATCACTTGCATTGCCAACA TTTGGTGCACACCTAATAGTACTCCTAGGGCTTCCATTACTAATAGCATCAGTTGCTGCAGATGGGGTTCCAACAGGGGC TCGACTGGGAGATCTGCTTTTGGGGGGTAATTTCAAGTAACTTGGAGGAGTTTCATCACGT |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ef|XP_002319543.1| predicted protein [Populus trichocarpa] >gi|... 102 3e-20 >ref|XP_002319543.1| predicted protein [Populus trichocarpa] gb|EEE95466.1| predicted protein [Populus trichocarpa] | 102 | 3e-20 |
Manihot esculenta | blastn | cassava4.1_030718m|PACid:17992876 | 391 | 1e-108 |
FGENESH CDS | blastn | scaffold03572_FGENESH9 17 exon (s) 117594 - 123259 2040 bp, chain - | 391 | 1e-108 |
Arabidopsis thaliana | blastx | AT1G09000.1 | Symbols: ANP1, MAPKKK1, NP1 | NPK1-related protein kinase 1 | chr1:2891111-2894987 FORWARD LENGTH=666 | 58.2 | 1e-09 |
Populus trichocarpa | blastx | POPTR_0013s02360.1|PACid:18221893 | 102 | 9e-23 |
Vitis vinifera | blastx | GSVIVT01000047001|PACid:17816662 | 85.5 | 5e-18 |
Ricinus communis | blastx | 30128.m008771|PACid:16818360 | 100 | 1e-22 |
InterProScan |
No hits found |
Sequence: CK901188_4_ORF2 Length: 63 aa | |||||||
noIPR unintegrated |
|
Sequence: CK901188_5_ORF1 Length: 73 aa | |
No hits reported. |