Home > Keyword search > CK648893

Summary
Sequence ID CK648893
Sequence Length 349 nucleotides
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Gbrowse Rco  Mapped
Gbrowse Ptr  -
Gbrowse Vvi  -
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_014833 (CK648893)
 
 
Sequence
>CK648893
TTCGGACAGGGCGAAGGATTTTCTATCCAAGTGTTTTGTTAAGGATCCTAGAAAGAGATGGACGGCTGATTTGCTATTAA
ATCATCCTTTTATTGCTAATGAAACCACTGTTACATTGAAGGAGAAGGAGCAATTATCTCCATCATCATCACCCAGATGT
CCATTTGAGTTTCCAGAGTGGGTTTCAGTTCCATCTTCATCACCGAAATCTGAATTATGGTCTAACAAGGAAGTAGAATC
AAGATTTGATTGGTCCTCTTTGTCATATTCGCCTTCGCCGGCAGAGAGACTCCGACAGCTGGGGAGTGATGAGGGATGCA
ACTGGTCATTTTCTGAGAGTTGGGTGACT

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002523600.1| ATP binding protein, putative [Ricinus communis] gb|EEF38795.1| ATP binding protein, putative [Ricinus communis] 168 3e-40
  Manihot esculenta blastn  cassava4.1_010778m|PACid:17992966 674 0.0
  FGENESH CDS blastn  scaffold03060_FGENESH37 2 exon (s) 304624 - 305905 1128 bp, chain + 674 0.0
  Arabidopsis thaliana blastx  AT5G67080.1 | Symbols: MAPKKK19 | mitogen-activated protein kinase kinase kinase 19 | chr5:26772726-26773760 FORWARD LENGTH=344 98.6 8e-22
  Populus trichocarpa blastx  POPTR_0007s10930.1|PACid:18242944 129 5e-31
  Vitis vinifera blastx  GSVIVT01022117001|PACid:17831030 121 8e-29
  Ricinus communis blastx  30115.m001222|PACid:16818001 168 6e-43
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: CK648893_2_ORF1  Length: 116 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-30]T 2e-09 PD000001 Q9FHA5_ARATH_Q9FHA5;Q9FHA5_ARATH_Q9FHA5;
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[1-62]T 7.7e-09 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[1-31]T 1e-09 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
PTHR22986[1-67]T 7.5e-17 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF58[1-67]T 7.5e-17 PTHR22986:SF58 MITOGEN ACTIVATED PROTEIN KINASE-RELATEDMITOGEN ACTIVATED PROTEIN KINASE-RELATED
Sequence: CK648893_4_ORF1  Length: 88 aa
No hits reported.