Home > Keyword search > CK644269

Summary
Sequence ID CK644269
Sequence Length 406 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  Mapped
Gbrowse Ath  Mapped
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_014214 (CK644269)
 
 
Sequence
>CK644269
CATAGTTCAGTATTACGGTACTGATAAGGATGAATCAAAACTATATATCTTTCTTGAGCTTGTAACTAAAGGATCCCTTA
TGAATCTCTATCAAAGATACAATCTTCGAGATTCACAAGTTTCTGCATACACAAGACAGATTTTGCACGGTTTGAAATAT
CTTCATGATCGAAATGTTGTTCACAGGGATATCAAATGTGCAAATATACTGGTAGATGCTAATGGATCAGTGAAACTTGC
AGATTTTGGATTAGCAAAGGCAACAAAATTGAATGATGTTAAATCTTGCAAGGGGACTGCATTTTGGATGGCACCTGAGG
TTGTTAATAGGAAAAATCAGGGTTATGGCCTTCCAGCTGATATATGGAGTCTTGGATGTACTGTTTTGGAGATGTTAACT
CGCCAG

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ef|XP_002306607.1| predicted protein [Populus trichocarpa] >gi|... 267 4e-70 >ref|XP_002306607.1| predicted protein [Populus trichocarpa] gb|EEE93603.1| predicted protein [Populus trichocarpa] 267 4e-70
  Manihot esculenta blastn  cassava4.1_004510m|PACid:17993016 797 0.0
  FGENESH CDS blastn  scaffold04065_FGENESH23 9 exon (s) 193429 - 198655 1947 bp, chain - 797 0.0
  Arabidopsis thaliana blastx  AT4G08500.1 | Symbols: MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MAPK/ERK kinase kinase 1 | chr4:5404272-5407062 REVERSE LENGTH=608 219 6e-58
  Populus trichocarpa blastx  POPTR_0005s16210.1|PACid:18206854 267 2e-72
  Vitis vinifera blastx  GSVIVT01023079001|PACid:17831673 248 7e-67
  Ricinus communis blastx  29908.m006213|PACid:16813029 262 3e-71
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: CK644269_2_ORF1  Length: 135 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-133]T 4e-63 PD000001 Q7XTK4_MEDSA_Q7XTK4;Q7XTK4_MEDSA_Q7XTK4;
PS50011[1-135]T 35.170 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR001245
Domain
Tyrosine protein kinase
PR00109[18-31]T 1.2e-09 PR00109 TYRKINASE[53-71]T 1.2e-09 PR00109 TYRKINASE[119-135]T 1.2e-09 PR00109 TYRKINASETYRKINASE
SM00219[1-135]T 0.00013 SM00219 no descriptionno description
InterPro
IPR002290
Domain
Serine/threonine protein kinase
SM00220[1-135]T 1.8e-12 SM00220 no descriptionno description
InterPro
IPR008271
Active_site
Serine/threonine protein kinase, active site
PS00108[59-71]T 8e-5 PS00108 PROTEIN_KINASE_STPROTEIN_KINASE_ST
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[1-135]T 2.3e-46 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[1-135]T 9.5e-45 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[9-135]T 2.8e-40 G3DSA:1.10.510.10 no descriptionno description
PTHR22986[1-135]T 7e-73 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF63[1-135]T 7e-73 PTHR22986:SF63 MITOGEN ACTIVATED PROTEIN KINASE-RELATEDMITOGEN ACTIVATED PROTEIN KINASE-RELATED
Sequence: CK644269_4_ORF2  Length: 51 aa
No hits reported.