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Summary
Sequence ID CAS01_044_D12.r (DB952670)
Sequence Length 530 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  -
Gbrowse Vvi  Mapped
Gbrowse Ath  Mapped
Transcript scaffold composed of the full-length cDNA(s)  Scaffold06978
Related probe ID of RIKEN ver.1 microarray  R_Mes01_005475 (Scaffold06978)
 
 
Sequence
>CAS01_044_D12.r
TGCTTTATACCTCATGGCAGTGTCTGTTCTGGCTGGCTTCTGGGGACAGTTCTTTATAAGGAAGCTGGTGTCAATACTGA
GAAGAGCTTCACTCATCGTTTTCATCCTCTCTGGTGTCATTTTTGCCAGTGCTCTCACCATGGGAGTCATTGGAATTGAG
AGTAGTATAGAAATGATAAAGAATCATGAGTTCATGGGATTCTTAGGTTTCTGCAGCAGTCAATGATCGTTGGCAAATGT
TGCCTCCTCTTTCATCAAGGAAATTTGATGAAGCTAGAATAGAAAGCAATTGGATAATATGGTTGGCCAGCACCTAGTTG
TCCAACCCACTTCAAAATTGTGATTGGAATAATGGAGGATGTGAGATTTGCAGAGTGTTTGTGTAATGTATTTTTGAGTG
TTAGCTGCTGGCTGACACCATCAATTCTAGATTTCATTTGTGCTTGTGCCTGTTAGTCTGTGTTAGCTCCTGGCTGACAC
CATTTCAATAAAAAAGAATGTTTCATGTACAACTCGATTAATATTTATTT

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002528632.1| conserved hypothetical protein [Ricinus communis] gb|EEF33735.1| conserved hypothetical protein [Ricinus communis] 127 9e-28
  Manihot esculenta blastn  cassava4.1_007299m|PACid:17975524 416 1e-116
  FGENESH CDS blastn  scaffold10247_FGENESH1 12 exon (s) 2333 - 4965 1377 bp, chain + 416 1e-116
  Arabidopsis thaliana blastx  AT2G36630.1 | Symbols: | Sulfite exporter TauE/SafE family protein | chr2:15352767-15355050 REVERSE LENGTH=459 126 9e-30
  Populus trichocarpa blastx  POPTR_0006s11920.1|PACid:18213888 124 4e-29
  Vitis vinifera blastx  GSVIVT01033741001|PACid:17839399 120 5e-28
  Ricinus communis blastx  29815.m000496|PACid:16809552 127 4e-30
 
 
Gene Ontology 
InterProScan
GO:0004289
Molecular Function
subtilase activity
GO:0006508
Biological Process
proteolysis
 
 
InterProScan result 
detail
Sequence: CAS01_044_D12.r_1_ORF1  Length: 52 aa
InterPro
IPR000209
Domain
Peptidase S8 and S53, subtilisin, kexin, sedolisin
PS00137[5-15]? NA PS00137 SUBTILASE_HISSUBTILASE_HIS
Sequence: CAS01_044_D12.r_1_ORF2  Length: 52 aa
No hits reported.
Sequence: CAS01_044_D12.r_2_ORF1  Length: 74 aa
noIPR
unintegrated
unintegrated
PTHR14255[1-74]T 1.8e-15 PTHR14255 ATP-DEPENDENT PROTEASE (CEREBLON)ATP-DEPENDENT PROTEASE (CEREBLON)
Sequence: CAS01_044_D12.r_4_ORF2  Length: 61 aa
No hits reported.
Sequence: CAS01_044_D12.r_6_ORF2  Length: 65 aa
No hits reported.