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Summary
Sequence ID CAS01_026_N01.f (DB929351)
Sequence Length 633 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  -
Gbrowse Ath  Mapped
Transcript scaffold composed of the full-length cDNA(s)  Scaffold06926
Probe ID of RIKEN ver.1 microarray  -
 
 
Sequence
>CAS01_026_N01.f
GGTGGAGTTAAAAATACGCCCCCCAAAGAAGAATTGTCAAACACTAAGCACCTACCGCACCCACCCCCCTCCCCAACTAA
TAAGCTCAGGAGTCGGGTCCGGTTTCGGATCATCCGAGTTCACTGCCGCGTCAATGGAGTCGAGCTCTGGCTCCGGCGAG
CACAACGTCAGAGGAATACCTACTCACGGTGGACGCTACGTGCAGTATAATGTGTACGGCAACCTCTTTGAAGTATCTAG
AAAGTATGTCCCTCCTATTCGCCCTGTTGGCCGAGGTGCTTATGGTATTGTTTGGTAAGATTCTTATCGACTTCCTTGTT
ATCCTTTTTCGCCCCTCTTATCCAAGATCATGTGGTTTATTAGCTTGTTTTCTTGCTCTTCAGCTGTTCGGTTCGTTGTT
TAAGTTTGTTTGCTTAGTGTTCTGTTGGGTTTGTTTAGGATTCGATTGTTTTTGGAGTGTTGCATGCATACATAATATTC
TTACCAAATTAGCTTAGTTTTCAACTGCAATTTGGATGATCCGTATCGTAAATATATAGTTGACTTCAATTTCATGATTT
GATTAGGTATGTATTGCCCTACTTTTCTTCTAAAAATCTTCCATTATTGTTTTAATGCTTTCATAGCTGTCTA

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002511904.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF50573.1| big map kinase/bmk, putative [Ricinus communis] 106 3e-21
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx  AT2G46070.2 | Symbols: MPK12 | mitogen-activated protein kinase 12 | chr2:18946301-18947770 REVERSE LENGTH=324 94.7 4e-20
  Populus trichocarpa blastx  POPTR_0002s16400.1|PACid:18245680 100 1e-21
  Vitis vinifera blastx  GSVIVT01026984001|PACid:17834523 103 6e-23
  Ricinus communis blastx  30174.m008647|PACid:16822293 106 1e-23
 
 
Gene Ontology 
InterProScan
No hits found
 
 
InterProScan result 
Sequence: CAS01_026_N01.f_1_ORF1  Length: 69 aa
No hits reported.
Sequence: CAS01_026_N01.f_2_ORF1  Length: 98 aa
noIPR
unintegrated
unintegrated
PTHR11295[52-97]T 8e-11 PTHR11295 CDC2, MAP KINASE-RELATEDCDC2, MAP KINASE-RELATED
PTHR11295:SF69[52-97]T 8e-11 PTHR11295:SF69 MITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATEDMITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATED
seg[28-38]? NA seg seg[42-53]? NA seg segseg
Sequence: CAS01_026_N01.f_3_ORF2  Length: 137 aa
No hits reported.
Sequence: CAS01_026_N01.f_5_ORF2  Length: 68 aa
No hits reported.