Sequence ID | CAS01_023_D19.f (DB928063) | |
Sequence Length | 645 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | - | |
Gbrowse Ath | Mapped | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold10446 | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_008081 (Scaffold10446) |
>CAS01_023_D19.f GGTGGAGTTAAAAATACGCCCCCCAAAGAAGAATTGTCAAACACTAAGCACCTACCGCACCCACCCCCCTCCCCAACTAA TAAGCTCAGGAGTCGGGTCCGGTTTCGGATCATCCGAGTTCACTGCCGCGTCAATGGAGTCGAGCTCTGGCTCCGGCGAG CACAACGTCAGAGGAATACCTACTCACGGTGGACGCTACGTGCAGTATAATGTGTACGGCAACCTCTTTGAAGTATCTAG AAAGTATGTCCCTCCTATTCGCCCTGTTGGCCGAGGTGCTTATGGTATTGTTTGGTAAGATTCTTATCGACTTCCTTGTT ATCCTTTTTCGCCCCTCTTATCCAAGATCATGTGGTTTATTAGCTTGTTTTCTTGCTCTTCAGCTGTTCGGTTCGTTGTT TAAGTTTGTTTGCTTAGTGTTCTGTTGGGTTTGTTTAGGATTCGATTGTTTTTGGAGTGTTGCATGCATACATAATATTC TTACCAAATTAGCTTAGTTTTCAACTGCAATTTGGATGATCCGTATCGTAAATATATAGTTGACTTCAATTTCATGATTT GATTAGGTATGTATTGCCCTACTTTTCTTCTAAAAGATCTTCCATTATTGTTTTAATGCTTTCATAGCTGTCTATTTCCA ACCAA |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002511904.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF50573.1| big map kinase/bmk, putative [Ricinus communis] | 106 | 3e-21 |
Manihot esculenta | blastn | - | - | - |
FGENESH CDS | blastn | - | - | - |
Arabidopsis thaliana | blastx | AT2G46070.2 | Symbols: MPK12 | mitogen-activated protein kinase 12 | chr2:18946301-18947770 REVERSE LENGTH=324 | 94.7 | 4e-20 |
Populus trichocarpa | blastx | POPTR_0002s16400.1|PACid:18245680 | 100 | 1e-21 |
Vitis vinifera | blastx | GSVIVT01026984001|PACid:17834523 | 103 | 7e-23 |
Ricinus communis | blastx | 30174.m008647|PACid:16822293 | 106 | 1e-23 |
InterProScan |
No hits found |
Sequence: CAS01_023_D19.f_1_ORF1 Length: 69 aa | |
No hits reported. |
Sequence: CAS01_023_D19.f_2_ORF1 Length: 98 aa | |||||||||||||
noIPR unintegrated |
|
Sequence: CAS01_023_D19.f_3_ORF2 Length: 137 aa | |
No hits reported. |
Sequence: CAS01_023_D19.f_5_ORF2 Length: 68 aa | |
No hits reported. |