Sequence ID | CAS01_016_N11.r (DB943948) | |
Sequence Length | 527 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | Mapped | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold06979 | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_005476 (Scaffold06979) |
>CAS01_016_N11.r CTGGCTGGCTTCTGGGGACAGCCATGTTTTAGGAAGCTTTTTGCAATAATAAGAAGAGCTTCACTCATCGTTTTCATCCT TCGAGTTGTCATTTTTGCCAGTGCTCTTATCATGGGAGTCATTGGAATTGAGAGTAGTATAGAAATGATAAAGAATCATG AGTTCATGGGATTCTTAGGTTTCTGCAGCAGTCAATGATCGTTGGCAAATGTTGCCTCCTCTTTCATCAAGGAAATTTGA TGAAGCTAGAATAGAAAGCAATTGGATAATATGGTTGGCCAGCACCTAGTTGTCCAACCCACTTCAAAATTGTGATTGGA ATAATGGAGGATGTGAGATTTGCAGAGTGTTTGTGTAATGTATTTTTGAGTGTTAGCTGCTGGCTGACACCATCAATTCT AGATTTCATTTGTGCTTGTGCCTGTTAGTCTGTGTTAGCTCCTGGCTGACACCATTTCAATAAAAAAGAATGTTTCATGT ACAACTCGATTAATATTTATTTAATAAATAATAGTCTTTATTGATTC |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|NP_850267.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gb|AAL77676.1| At2g36630/F1O11.26 [Arabidopsis thaliana] gb|AAM91463.1| At2g36630/F1O11.26 [Arabidopsis thaliana] gb|AEC09275.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] | 101 | 5e-20 |
Manihot esculenta | blastn | - | - | - |
FGENESH CDS | blastn | - | - | - |
Arabidopsis thaliana | blastx | AT2G36630.1 | Symbols: | Sulfite exporter TauE/SafE family protein | chr2:15352767-15355050 REVERSE LENGTH=459 | 101 | 3e-22 |
Populus trichocarpa | blastx | POPTR_0006s11920.1|PACid:18213888 | 91.3 | 4e-19 |
Vitis vinifera | blastx | GSVIVT01033741001|PACid:17839399 | 92.4 | 1e-19 |
Ricinus communis | blastx | 29815.m000496|PACid:16809552 | 97.1 | 4e-21 |
InterProScan |
No hits found |
Sequence: CAS01_016_N11.r_1_ORF1 Length: 65 aa | |||||||
noIPR unintegrated |
|
Sequence: CAS01_016_N11.r_3_ORF2 Length: 52 aa | |
No hits reported. |
Sequence: CAS01_016_N11.r_5_ORF2 Length: 65 aa | |
No hits reported. |