Home > Keyword search > CAS01_014_E15.r

Summary
Sequence ID CAS01_014_E15.r (DB943118)
Sequence Length 364 nucleotides
Gbrowse Mes 
Gbrowse Rco  -
Gbrowse Ptr  -
Gbrowse Vvi  -
Gbrowse Ath  -
Transcript scaffold composed of the full-length cDNA(s)  Scaffold09918
Related probe ID of RIKEN ver.1 microarray  R_Mes01_007558 (Scaffold09918)
 
 
Sequence
>CAS01_014_E15.r
TGGAGATGTTAACTAGGAAATATAAATACTCTCATGTGAGTGGTTTGAATGCAAATCTAGAAATGGTGGCGGAAAATGGT
ACACTTCGAAATCATCTTCCTAATTGTTCTCTATCAGAGAATGCGCGAAATTTTATCATGGACTGCCTGCAAGTTGAACC
AAAAAAGCGTCCAACTGCTTCTCAGCTTTTGAATCATTCATTTGTGAAGGACTCTAGCTTTTAGCACTTTTCAAATTTCA
ATCAACTCCCTAAAATTTCTTCTTCAGCTTGAACTACCTGAACGAATGCTTGCTGTTTATGAGCATTTCTTCATTTATGA
ACATGAGTGTACCAAAATCATTTTGTAACATCATGTTTAAGGTC

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  emb|CBI23919.3| unnamed protein product [Vitis vinifera] 61.6 4e-08
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx  AT4G08480.1 | Symbols: MAPKKK9, MEKK2 | mitogen-activated protein kinase kinase kinase 9 | chr4:5388253-5391507 REVERSE LENGTH=773 49.7 5e-07
  Populus trichocarpa blastx  POPTR_0002s08950.1|PACid:18245706 53.1 5e-08
  Vitis vinifera blastx  GSVIVT01023079001|PACid:17831673 61.6 8e-11
  Ricinus communis blastx  29908.m006213|PACid:16813029 58.2 9e-10
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: CAS01_014_E15.r_3_ORF1  Length: 73 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-67]T 1e-06 PD000001 Q75I98_EEEEE_Q75I98;Q75I98_EEEEE_Q75I98;
PS50011[1-68]T 8.726 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[1-70]T 6.9e-09 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[1-68]T 1.8e-09 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[1-72]T 6e-05 G3DSA:1.10.510.10 no descriptionno description
PTHR22986[1-70]T 1.1e-10 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF63[1-70]T 1.1e-10 PTHR22986:SF63 MITOGEN ACTIVATED PROTEIN KINASE-RELATEDMITOGEN ACTIVATED PROTEIN KINASE-RELATED