Home > Microarray > Keyword search > R_Mes01_006392

Summary
Probe sequence ID R_Mes01_006392
Target sequence ID Scaffold08342
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_006392|Scaffold08342
AAGAGGTCACCAATGTGCTCTGAGATGCAAGAAAATTCATTGATATGACGAGTATTTTTT
 
 
BLAST results
Query ID: Contig09240
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002520198.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF42253.1| pyruvate dehydrogenase, putative [Ricinus communis] 723 0.0
  Manihot esculenta blastn  cassava4.1_007540m|PACid:17993625 2498 0.0
  FGENESH CDS blastn  scaffold04209_FGENESH40 8 exon (s) 375314 - 379604 1191 bp, chain + 2298 0.0
  Arabidopsis thaliana blastx  AT1G59900.1 | Symbols: AT-E1 ALPHA, E1 ALPHA | pyruvate dehydrogenase complex E1 alpha subunit | chr1:22051368-22053660 FORWARD LENGTH=389 661 0.0
  Populus trichocarpa blastx  POPTR_0010s04790.1|PACid:18240850 701 0.0
  Vitis vinifera blastx  GSVIVT01020139001|PACid:17829615 355 4e-98
  Ricinus communis blastx  29736.m002097|PACid:16807202 723 0.0

Query ID: CAS01_040_D18.r
vs DB Program Description Score E value
  NCBI nr blastx - - -
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx - - -
  Populus trichocarpa blastx - - -
  Vitis vinifera blastx - - -
  Ricinus communis blastx - - -