Probe sequence ID | R_Mes01_005481 | |
Target sequence ID | Scaffold06989 | |
Sequence composing scaffold | ||
Probe sequence length | 60 nucleotides | |
Probe sequence | >R_Mes01_005481|Scaffold06989 TGTGAAGAGTTTCTCCTTTAGTAAACGAGAAGGTGGAGATTTTTCTACAGCATGTTTCTC |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002511981.1| WD-repeat protein, putative [Ricinus communis] gb|EEF50650.1| WD-repeat protein, putative [Ricinus communis] | 254 | 8e-66 |
Manihot esculenta | blastn | cassava4.1_005782m|PACid:17960266 | 763 | 0.0 |
FGENESH CDS | blastn | scaffold07762_FGENESH44 23 exon (s) 401239 - 412448 2013 bp, chain + | 418 | 1e-116 |
Arabidopsis thaliana | blastx | AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40 repeat family protein | chr1:27725059-27729722 FORWARD LENGTH=511 | 234 | 4e-62 |
Populus trichocarpa | blastx | POPTR_0011s16030.1|PACid:18232292 | 249 | 9e-67 |
Vitis vinifera | blastx | GSVIVT01007685001|PACid:17820443 | 249 | 1e-66 |
Ricinus communis | blastx | 30174.m008725|PACid:16822370 | 254 | 3e-68 |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ef|XP_002317691.1| predicted protein [Populus trichocarpa] >gi|... 197 6e-49 >ref|XP_002317691.1| predicted protein [Populus trichocarpa] gb|EEE98303.1| predicted protein [Populus trichocarpa] | 197 | 6e-49 |
Manihot esculenta | blastn | cassava4.1_008129m|PACid:17960267 | 527 | 1e-149 |
FGENESH CDS | blastn | - | - | - |
Arabidopsis thaliana | blastx | AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40 repeat family protein | chr1:27725059-27729722 FORWARD LENGTH=511 | 176 | 6e-45 |
Populus trichocarpa | blastx | POPTR_0011s16030.1|PACid:18232292 | 197 | 4e-51 |
Vitis vinifera | blastx | GSVIVT01007685001|PACid:17820443 | 189 | 5e-49 |
Ricinus communis | blastx | 30174.m008725|PACid:16822370 | 92.0 | 1e-19 |