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Summary
Probe sequence ID R_Mes01_005478
Target sequence ID Scaffold06986
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_005478|Scaffold06986
GGCATATCAAATATGATATGGAAGATTAAGCATAACGAATACATGGGATTTGAGAACCTC
 
 
BLAST results
Query ID: Contig05823
vs DB Program Description Score E value
  NCBI nr blastx  sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carboxylase small chain, chloroplastic; Short=RuBisCO small subunit; Flags: Precursor gb|AAA99429.1| ribulose 1,5-bisphosphate carboxylase [Manihot esculenta] gb|AAF06099.1| ribulose 1,5-bisphosphate carboxylase small chain precursor [Manihot esculenta] 378 1e-102
  Manihot esculenta blastn  cassava4.1_017243m|PACid:17990746 1088 0.0
  FGENESH CDS blastn  scaffold10493_FGENESH3 3 exon (s) 25373 - 26217 549 bp, chain - 1088 0.0
  Arabidopsis thaliana blastx  AT5G38430.1 | Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15384350-15385155 REVERSE LENGTH=181 284 7e-77
  Populus trichocarpa blastx  POPTR_0005s15660.1|PACid:18208907 280 2e-75
  Vitis vinifera blastx  GSVIVT01008288001|PACid:17820914 240 8e-64
  Ricinus communis blastx  29974.m000232|PACid:16814754 318 4e-87

Query ID: CAS01_047_B01.r
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002516571.1| conserved hypothetical protein [Ricinus communis] gb|EEF45912.1| conserved hypothetical protein [Ricinus communis] 180 7e-44
  Manihot esculenta blastn  cassava4.1_006911m|PACid:17982313 517 1e-146
  FGENESH CDS blastn  scaffold09576_FGENESH19 12 exon (s) 239688 - 243722 1416 bp, chain - 517 1e-146
  Arabidopsis thaliana blastx  AT2G25737.1 | Symbols: | Sulfite exporter TauE/SafE family protein | chr2:10977174-10979677 FORWARD LENGTH=476 149 1e-36
  Populus trichocarpa blastx  POPTR_0006s25880.1|PACid:18212575 157 3e-39
  Vitis vinifera blastx  GSVIVT01035669001|PACid:17840790 158 2e-39
  Ricinus communis blastx  29794.m003451|PACid:16808810 180 3e-46