Home > Microarray > Keyword search > R_Mes01_005344

Summary
Probe sequence ID R_Mes01_005344
Target sequence ID Scaffold06804
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_005344|Scaffold06804
CAACTGGATTCATCAAGCTGTTGAAGGAGCAGGATTATGTTGTCAGCACTTATCGTGATC
 
 
BLAST results
Query ID: Contig05684
vs DB Program Description Score E value
  NCBI nr blastx  gb|ABK95003.1| unknown [Populus trichocarpa] 215 3e-54
  Manihot esculenta blastn  cassava4.1_007973m|PACid:17975763 880 0.0
  FGENESH CDS blastn  scaffold03581_FGENESH19 3 exon (s) 162089 - 164446 1305 bp, chain - 880 0.0
  Arabidopsis thaliana blastx  AT1G01090.1 | Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1 alpha | chr1:47705-49166 REVERSE LENGTH=428 177 7e-45
  Populus trichocarpa blastx  POPTR_0002s18020.1|PACid:18244467 215 2e-56
  Vitis vinifera blastx  GSVIVT01027439001|PACid:17834819 191 2e-49
  Ricinus communis blastx  30076.m004445|PACid:16817058 214 3e-56

Query ID: Contig05685
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF47058.1| pyruvate dehydrogenase, putative [Ricinus communis] 162 2e-38
  Manihot esculenta blastn  cassava4.1_007973m|PACid:17975763 509 1e-144
  FGENESH CDS blastn  scaffold03581_FGENESH19 3 exon (s) 162089 - 164446 1305 bp, chain - 509 1e-144
  Arabidopsis thaliana blastx  AT1G01090.1 | Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1 alpha | chr1:47705-49166 REVERSE LENGTH=428 147 4e-36
  Populus trichocarpa blastx  POPTR_0002s18020.1|PACid:18244467 159 2e-39
  Vitis vinifera blastx  GSVIVT01027439001|PACid:17834819 152 9e-38
  Ricinus communis blastx  30076.m004445|PACid:16817058 162 8e-41