Probe sequence ID | R_Mes01_005344 | |
Target sequence ID | Scaffold06804 | |
Sequence composing scaffold | ||
Probe sequence length | 60 nucleotides | |
Probe sequence | >R_Mes01_005344|Scaffold06804 CAACTGGATTCATCAAGCTGTTGAAGGAGCAGGATTATGTTGTCAGCACTTATCGTGATC |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | gb|ABK95003.1| unknown [Populus trichocarpa] | 215 | 3e-54 |
Manihot esculenta | blastn | cassava4.1_007973m|PACid:17975763 | 880 | 0.0 |
FGENESH CDS | blastn | scaffold03581_FGENESH19 3 exon (s) 162089 - 164446 1305 bp, chain - | 880 | 0.0 |
Arabidopsis thaliana | blastx | AT1G01090.1 | Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1 alpha | chr1:47705-49166 REVERSE LENGTH=428 | 177 | 7e-45 |
Populus trichocarpa | blastx | POPTR_0002s18020.1|PACid:18244467 | 215 | 2e-56 |
Vitis vinifera | blastx | GSVIVT01027439001|PACid:17834819 | 191 | 2e-49 |
Ricinus communis | blastx | 30076.m004445|PACid:16817058 | 214 | 3e-56 |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF47058.1| pyruvate dehydrogenase, putative [Ricinus communis] | 162 | 2e-38 |
Manihot esculenta | blastn | cassava4.1_007973m|PACid:17975763 | 509 | 1e-144 |
FGENESH CDS | blastn | scaffold03581_FGENESH19 3 exon (s) 162089 - 164446 1305 bp, chain - | 509 | 1e-144 |
Arabidopsis thaliana | blastx | AT1G01090.1 | Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1 alpha | chr1:47705-49166 REVERSE LENGTH=428 | 147 | 4e-36 |
Populus trichocarpa | blastx | POPTR_0002s18020.1|PACid:18244467 | 159 | 2e-39 |
Vitis vinifera | blastx | GSVIVT01027439001|PACid:17834819 | 152 | 9e-38 |
Ricinus communis | blastx | 30076.m004445|PACid:16817058 | 162 | 8e-41 |