Probe sequence ID | R_Mes01_004536 | |
Target sequence ID | Scaffold05802 | |
Sequence composing scaffold | ||
Probe sequence length | 60 nucleotides | |
Probe sequence | >R_Mes01_004536|Scaffold05802 TTGAAAGTCCAAGGGGGTGCAGGGAACGTGAACCATTTGTGGTTTCCATTCCAAACAATA |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF47058.1| pyruvate dehydrogenase, putative [Ricinus communis] | 772 | 0.0 |
Manihot esculenta | blastn | cassava4.1_008040m|PACid:17963786 | 2575 | 0.0 |
FGENESH CDS | blastn | scaffold07571_FGENESH10 3 exon (s) 69747 - 72173 1299 bp, chain + | 2575 | 0.0 |
Arabidopsis thaliana | blastx | AT1G01090.1 | Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1 alpha | chr1:47705-49166 REVERSE LENGTH=428 | 691 | 0.0 |
Populus trichocarpa | blastx | POPTR_0002s18020.1|PACid:18244467 | 751 | 0.0 |
Vitis vinifera | blastx | GSVIVT01027439001|PACid:17834819 | 725 | 0.0 |
Ricinus communis | blastx | 30076.m004445|PACid:16817058 | 772 | 0.0 |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF47058.1| pyruvate dehydrogenase, putative [Ricinus communis] | 85.5 | 5e-17 |
Manihot esculenta | blastn | - | - | - |
FGENESH CDS | blastn | - | - | - |
Arabidopsis thaliana | blastx | AT1G01090.1 | Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1 alpha | chr1:47705-49166 REVERSE LENGTH=428 | 83.6 | 2e-17 |
Populus trichocarpa | blastx | POPTR_0002s18020.1|PACid:18244467 | 82.4 | 2e-17 |
Vitis vinifera | blastx | GSVIVT01027439001|PACid:17834819 | 84.3 | 2e-18 |
Ricinus communis | blastx | 30076.m004445|PACid:16817058 | 85.5 | 2e-19 |