Home > Microarray > Keyword search > R_Mes01_004536

Summary
Probe sequence ID R_Mes01_004536
Target sequence ID Scaffold05802
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_004536|Scaffold05802
TTGAAAGTCCAAGGGGGTGCAGGGAACGTGAACCATTTGTGGTTTCCATTCCAAACAATA
 
 
BLAST results
Query ID: Contig04787
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF47058.1| pyruvate dehydrogenase, putative [Ricinus communis] 772 0.0
  Manihot esculenta blastn  cassava4.1_008040m|PACid:17963786 2575 0.0
  FGENESH CDS blastn  scaffold07571_FGENESH10 3 exon (s) 69747 - 72173 1299 bp, chain + 2575 0.0
  Arabidopsis thaliana blastx  AT1G01090.1 | Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1 alpha | chr1:47705-49166 REVERSE LENGTH=428 691 0.0
  Populus trichocarpa blastx  POPTR_0002s18020.1|PACid:18244467 751 0.0
  Vitis vinifera blastx  GSVIVT01027439001|PACid:17834819 725 0.0
  Ricinus communis blastx  30076.m004445|PACid:16817058 772 0.0

Query ID: CAS01_033_K21.r
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF47058.1| pyruvate dehydrogenase, putative [Ricinus communis] 85.5 5e-17
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx  AT1G01090.1 | Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1 alpha | chr1:47705-49166 REVERSE LENGTH=428 83.6 2e-17
  Populus trichocarpa blastx  POPTR_0002s18020.1|PACid:18244467 82.4 2e-17
  Vitis vinifera blastx  GSVIVT01027439001|PACid:17834819 84.3 2e-18
  Ricinus communis blastx  30076.m004445|PACid:16817058 85.5 2e-19