Probe sequence ID | R_Mes01_004411 | |
Target sequence ID | Scaffold05657 | |
Sequence composing scaffold | ||
Probe sequence length | 60 nucleotides | |
Probe sequence | >R_Mes01_004411|Scaffold05657 GGAACTGAGGCATTTGGAGCAGATAGGAAAGAAGTAAGAGCTGTGCTTCCATAATGGAAT |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002520198.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF42253.1| pyruvate dehydrogenase, putative [Ricinus communis] | 247 | 7e-64 |
Manihot esculenta | blastn | cassava4.1_008364m|PACid:17988403 | 1090 | 0.0 |
FGENESH CDS | blastn | scaffold11495_FGENESH107 10 exon (s) 792465 - 796745 1407 bp, chain + | 892 | 0.0 |
Arabidopsis thaliana | blastx | AT1G24180.1 | Symbols: IAR4 | Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr1:8560777-8563382 REVERSE LENGTH=393 | 211 | 3e-55 |
Populus trichocarpa | blastx | POPTR_0010s04790.1|PACid:18240850 | 245 | 2e-65 |
Vitis vinifera | blastx | GSVIVT01027439001|PACid:17834819 | 65.9 | 1e-11 |
Ricinus communis | blastx | 29736.m002097|PACid:16807202 | 247 | 3e-66 |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002520198.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF42253.1| pyruvate dehydrogenase, putative [Ricinus communis] | 214 | 2e-53 |
Manihot esculenta | blastn | cassava4.1_007407m|PACid:17988402 | 662 | 0.0 |
FGENESH CDS | blastn | scaffold11495_FGENESH107 10 exon (s) 792465 - 796745 1407 bp, chain + | 664 | 0.0 |
Arabidopsis thaliana | blastx | AT1G59900.1 | Symbols: AT-E1 ALPHA, E1 ALPHA | pyruvate dehydrogenase complex E1 alpha subunit | chr1:22051368-22053660 FORWARD LENGTH=389 | 199 | 3e-51 |
Populus trichocarpa | blastx | POPTR_0008s19680.1|PACid:18248145 | 207 | 7e-54 |
Vitis vinifera | blastx | GSVIVT01020139001|PACid:17829615 | 190 | 7e-49 |
Ricinus communis | blastx | 29736.m002097|PACid:16807202 | 214 | 6e-56 |