Home > Microarray > Keyword search > R_Mes01_004411

Summary
Probe sequence ID R_Mes01_004411
Target sequence ID Scaffold05657
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_004411|Scaffold05657
GGAACTGAGGCATTTGGAGCAGATAGGAAAGAAGTAAGAGCTGTGCTTCCATAATGGAAT
 
 
BLAST results
Query ID: Contig04661
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002520198.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF42253.1| pyruvate dehydrogenase, putative [Ricinus communis] 247 7e-64
  Manihot esculenta blastn  cassava4.1_008364m|PACid:17988403 1090 0.0
  FGENESH CDS blastn  scaffold11495_FGENESH107 10 exon (s) 792465 - 796745 1407 bp, chain + 892 0.0
  Arabidopsis thaliana blastx  AT1G24180.1 | Symbols: IAR4 | Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr1:8560777-8563382 REVERSE LENGTH=393 211 3e-55
  Populus trichocarpa blastx  POPTR_0010s04790.1|PACid:18240850 245 2e-65
  Vitis vinifera blastx  GSVIVT01027439001|PACid:17834819 65.9 1e-11
  Ricinus communis blastx  29736.m002097|PACid:16807202 247 3e-66

Query ID: Contig04662
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002520198.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF42253.1| pyruvate dehydrogenase, putative [Ricinus communis] 214 2e-53
  Manihot esculenta blastn  cassava4.1_007407m|PACid:17988402 662 0.0
  FGENESH CDS blastn  scaffold11495_FGENESH107 10 exon (s) 792465 - 796745 1407 bp, chain + 664 0.0
  Arabidopsis thaliana blastx  AT1G59900.1 | Symbols: AT-E1 ALPHA, E1 ALPHA | pyruvate dehydrogenase complex E1 alpha subunit | chr1:22051368-22053660 FORWARD LENGTH=389 199 3e-51
  Populus trichocarpa blastx  POPTR_0008s19680.1|PACid:18248145 207 7e-54
  Vitis vinifera blastx  GSVIVT01020139001|PACid:17829615 190 7e-49
  Ricinus communis blastx  29736.m002097|PACid:16807202 214 6e-56