Home > Microarray > Keyword search > R_Mes01_002364

Summary
Probe sequence ID R_Mes01_002364
Target sequence ID Scaffold03077
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_002364|Scaffold03077
GGAATTGTGTTCACAAAAGCAAGTCCAGCAATGCGGCATAGCTACTAAATATGCACCAGA
 
 
BLAST results
Query ID: Contig02423
vs DB Program Description Score E value
  NCBI nr blastx - - -
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx - - -
  Populus trichocarpa blastx - - -
  Vitis vinifera blastx - - -
  Ricinus communis blastx - - -

Query ID: Contig02425
vs DB Program Description Score E value
  NCBI nr blastx  ef|XP_002300882.1| predicted protein [Populus trichocarpa] >gi|... 161 4e-38 >ref|XP_002300882.1| predicted protein [Populus trichocarpa] gb|EEE80155.1| predicted protein [Populus trichocarpa] 161 4e-38
  Manihot esculenta blastn  cassava4.1_004025m|PACid:17979428 718 0.0
  FGENESH CDS blastn  scaffold07520_FGENESH105 14 exon (s) 733781 - 742556 2109 bp, chain - 718 0.0
  Arabidopsis thaliana blastx  AT2G42880.1 | Symbols: ATMPK20, MPK20 | MAP kinase 20 | chr2:17840572-17843947 REVERSE LENGTH=606 92.8 1e-19
  Populus trichocarpa blastx  POPTR_0002s06080.1|PACid:18244319 164 4e-41
  Vitis vinifera blastx  GSVIVT01000784001|PACid:17817158 102 9e-23
  Ricinus communis blastx  29682.m000597|PACid:16805689 159 8e-40