Home > Microarray > Keyword search > R_Mes01_001957

Summary
Probe sequence ID R_Mes01_001957
Target sequence ID Scaffold02550
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_001957|Scaffold02550
TTTAAGCGTCTCATAAAGGATCAGAATGACCACTCTGACCTTGAAGAGGGTATCAGACGC
 
 
BLAST results
Query ID: Contig01971
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] gb|EEF33948.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] 266 9e-70
  Manihot esculenta blastn  cassava4.1_000822m|PACid:17992054 819 0.0
  FGENESH CDS blastn  scaffold03440_FGENESH1 8 exon (s) 5263 - 9984 3117 bp, chain + 819 0.0
  Arabidopsis thaliana blastx  AT5G65750.1 | Symbols: | 2-oxoglutarate dehydrogenase, E1 component | chr5:26304212-26307947 FORWARD LENGTH=1025 243 8e-65
  Populus trichocarpa blastx  POPTR_0008s05150.1|PACid:18248435 257 5e-69
  Vitis vinifera blastx  GSVIVT01016597001|PACid:17826992 249 6e-67
  Ricinus communis blastx  29585.m000607|PACid:16803171 266 3e-72

Query ID: Contig01972
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] gb|EEF33948.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] 349 1e-178
  Manihot esculenta blastn  cassava4.1_000822m|PACid:17992054 1957 0.0
  FGENESH CDS blastn  scaffold03440_FGENESH1 8 exon (s) 5263 - 9984 3117 bp, chain + 1140 0.0
  Arabidopsis thaliana blastx  AT5G65750.1 | Symbols: | 2-oxoglutarate dehydrogenase, E1 component | chr5:26304212-26307947 FORWARD LENGTH=1025 344 1e-171
  Populus trichocarpa blastx  POPTR_0010s21610.1|PACid:18240622 350 1e-175
  Vitis vinifera blastx  GSVIVT01016597001|PACid:17826992 353 1e-153
  Ricinus communis blastx  29585.m000607|PACid:16803171 349 1e-180