Probe sequence ID | R_Mes01_001957 | |
Target sequence ID | Scaffold02550 | |
Sequence composing scaffold | ||
Probe sequence length | 60 nucleotides | |
Probe sequence | >R_Mes01_001957|Scaffold02550 TTTAAGCGTCTCATAAAGGATCAGAATGACCACTCTGACCTTGAAGAGGGTATCAGACGC |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] gb|EEF33948.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] | 266 | 9e-70 |
Manihot esculenta | blastn | cassava4.1_000822m|PACid:17992054 | 819 | 0.0 |
FGENESH CDS | blastn | scaffold03440_FGENESH1 8 exon (s) 5263 - 9984 3117 bp, chain + | 819 | 0.0 |
Arabidopsis thaliana | blastx | AT5G65750.1 | Symbols: | 2-oxoglutarate dehydrogenase, E1 component | chr5:26304212-26307947 FORWARD LENGTH=1025 | 243 | 8e-65 |
Populus trichocarpa | blastx | POPTR_0008s05150.1|PACid:18248435 | 257 | 5e-69 |
Vitis vinifera | blastx | GSVIVT01016597001|PACid:17826992 | 249 | 6e-67 |
Ricinus communis | blastx | 29585.m000607|PACid:16803171 | 266 | 3e-72 |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] gb|EEF33948.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] | 349 | 1e-178 |
Manihot esculenta | blastn | cassava4.1_000822m|PACid:17992054 | 1957 | 0.0 |
FGENESH CDS | blastn | scaffold03440_FGENESH1 8 exon (s) 5263 - 9984 3117 bp, chain + | 1140 | 0.0 |
Arabidopsis thaliana | blastx | AT5G65750.1 | Symbols: | 2-oxoglutarate dehydrogenase, E1 component | chr5:26304212-26307947 FORWARD LENGTH=1025 | 344 | 1e-171 |
Populus trichocarpa | blastx | POPTR_0010s21610.1|PACid:18240622 | 350 | 1e-175 |
Vitis vinifera | blastx | GSVIVT01016597001|PACid:17826992 | 353 | 1e-153 |
Ricinus communis | blastx | 29585.m000607|PACid:16803171 | 349 | 1e-180 |