Home > Microarray > Keyword search > R_Mes01_000793

Summary
Probe sequence ID R_Mes01_000793
Target sequence ID Scaffold01035
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_000793|Scaffold01035
ATCGTTTTTCAAAAGCCAAACACCTGGCACATCTCCAAGAACAAGACCCATTTGAGACTG
 
 
BLAST results
Query ID: Contig00779
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002529731.1| mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative [Ricinus communis] gb|EEF32660.1| mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative [Ricinus communis] 361 1e-125
  Manihot esculenta blastn  cassava4.1_005325m|PACid:17973662 1836 0.0
  FGENESH CDS blastn  scaffold06948_FGENESH71 12 exon (s) 692141 - 696652 2208 bp, chain - 1059 0.0
  Arabidopsis thaliana blastx  AT1G53570.1 | Symbols: MAP3KA, MAPKKK3 | mitogen-activated protein kinase kinase kinase 3 | chr1:19987391-19990733 FORWARD LENGTH=609 159 5e-66
  Populus trichocarpa blastx  POPTR_0007s04070.1|PACid:18243224 264 2e-96
  Vitis vinifera blastx  GSVIVT01026487001|PACid:17834182 228 5e-87
  Ricinus communis blastx  29691.m000286|PACid:16805903 361 1e-128

Query ID: CAS01_016_A21.r
vs DB Program Description Score E value
  NCBI nr blastx  ef|XP_002309908.1| predicted protein [Populus trichocarpa] >gi|... 55 5e-06 >ref|XP_002309908.1| predicted protein [Populus trichocarpa] gb|EEE90358.1| predicted protein [Populus trichocarpa] 55.1 5e-06
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx - - -
  Populus trichocarpa blastx  POPTR_0007s04070.1|PACid:18243224 55.1 3e-08
  Vitis vinifera blastx - - -
  Ricinus communis blastx - - -