Home > Keyword search > FF536265

Summary
Sequence ID FF536265
Sequence Length 759 nucleotides
Gbrowse Mes  -
Gbrowse Rco  -
Gbrowse Ptr  -
Gbrowse Vvi  -
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_021319 (FF536265)
 
 
Sequence
>FF536265
GGTCATGCACATTACCACGAAGACTGTGATGGCTAAGAAGATTATTCACATCGACGTTAATCCGACCGTTCGCAAACAAA
TTCAACGAGAACTCCAAGTTCTTCATGATTGTAATTCAAGATACATCGTTTCATTCTATGGAGCATTCCCGAGTGACTCG
GGTATTTCGATGTGTATGGAGTACATGGATGTTGGTTCACTTGATAATATTTATAAGAAAAATGGACTCATTCCTCTGGA
TATAATTGGCAAGATTACAATAGCGGTTTTAGAAGGTCTTAACTATCTTTATGAAAGTCATCGAATTATTCACAGAGACG
TGAAACCATCAAATATTCTTGTCAATTCAAAAGGACAAATCAAGATTTGTGATTTTGGAGTATCTGGTAAACTTATTAAC
TCAATAGCAGATACATTTGTAGGAACATCAAATTACATGTCTCCTGAACGTATCCAAGGTGCCTCATACAGCGTACGATC
GGATGTCTGGTCAGTCGGAATTACTTTGATGGAGTTGGCAATGGGTCGATTTCCATTTCCTCCAGATGGTAGTCAGCTTA
CTGTTTTGGAGCTTTTACAACACATTGTACATGAACCAGCACCAAAACTACCACAAGGTCAATTCCCTGAAGACTTTTCT
GATTTCATTAATCAGTGTTTGTTGAAAGATGTAAAAATTCGGCCAACACCTAATGATCTATTGAAACATCCATATGTTAA
GGCTTCGGCTGAGGCCAATGTAGATGTTGAAACTTGGGC

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002842240.1| hypothetical protein [Tuber melanosporum Mel28] emb|CAZ86431.1| unnamed protein product [Tuber melanosporum] 332 3e-89
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx  AT4G29810.2 | Symbols: ATMKK2, MKK2, MK1 | MAP kinase kinase 2 | chr4:14593299-14595241 REVERSE LENGTH=372 202 2e-52
  Populus trichocarpa blastx  POPTR_0018s06810.2|PACid:18214995 202 3e-52
  Vitis vinifera blastx  GSVIVT01015155001|PACid:17825956 198 3e-51
  Ricinus communis blastx  29912.m005366|PACid:16813243 203 6e-53
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: FF536265_2_ORF1  Length: 252 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-229]T 3e-77 PD000001 Q8NIV5_NEUCR_Q8NIV5;Q8NIV5_NEUCR_Q8NIV5;
PS50011[1-239]T 41.361 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR001245
Domain
Tyrosine protein kinase
SM00219[3-239]T 1.2e-11 SM00219 no descriptionno description
InterPro
IPR002290
Domain
Serine/threonine protein kinase
SM00220[1-239]T 4.4e-63 SM00220 no descriptionno description
InterPro
IPR008271
Active_site
Serine/threonine protein kinase, active site
PS00108[102-114]T 8e-5 PS00108 PROTEIN_KINASE_STPROTEIN_KINASE_ST
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[1-240]T 1.6e-68 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[2-239]T 3.8e-67 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[49-240]T 1.9e-54 G3DSA:1.10.510.10 no descriptionno description
PTHR22986[1-252]T 8.3e-132 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF45[1-252]T 8.3e-132 PTHR22986:SF45 MITOGEN ACTIVATED PROTEIN KINASE KINASE-RELATEDMITOGEN ACTIVATED PROTEIN KINASE KINASE-RELATED
Sequence: FF536265_3_ORF2  Length: 71 aa
No hits reported.
Sequence: FF536265_3_ORF3  Length: 51 aa
No hits reported.
Sequence: FF536265_6_ORF2  Length: 56 aa
No hits reported.