Sequence ID | FF534385 | |
Sequence Length | 670 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | - | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_020718 (FF534385) |
>FF534385 GAAGAAAAAAATGACCCTCTTTGGGAAATTGGAGGCTGATGTAGAGGTGGCTGCTCCTGCAGACCAGTTTCATGATGTTT TCAGCTGCAGACCGCACCATGTATCCATTATGACCCCTGAAAAAATTCATGGTGTTGATCTCCATGATGGTGACTGGGGC AAAGAAGGCACTGTTATCTGCTGGAAATATTTTCATGATGGGTCTCCCAAGATAGCCAAGGAGATAATTGAAGCAATAGA TGATGTGAACTTATCAACCACCTTCAAAGTTGTAGAAGGAGATCTTCTGAATGATTACAAGAACTTCAAACTCATCGTTC AAGCTACACCAAAGGAGAAAGGAAGCTTGGTGCACTGGACCTTGGAATATGAAAAGATTCATGAGAATACTCAAGATCCC CATTCATTGCTGGAGTTTGTTGTTCATTGCAGCAAGGATATTTCTGCTCACCTTATGCAAGTCCAGGGGAACTGATGGAT CTTCAGCTATATATGCTCTGATAATACCTGTGATGTTTATAATAAATAAAGGGATGTTTAGCACAAGGTGAGCTTGTTTA TCTTTACGTGTGAATCTGTACCTGCTTCATATATACTAAATCTTAAAGCTACGTGGATCTGTTAATGATAATATCTAGCT TCGATCAATATAAGATAATGTATTACTGAT |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ef|XP_002315876.1| predicted protein [Populus trichocarpa] >gi|... 223 2e-56 >ref|XP_002315876.1| predicted protein [Populus trichocarpa] gb|EEF02047.1| predicted protein [Populus trichocarpa] | 223 | 2e-56 |
Manihot esculenta | blastn | cassava4.1_018249m|PACid:17969692 | 890 | 0.0 |
FGENESH CDS | blastn | scaffold04716_FGENESH17 2 exon (s) 99243 - 99820 465 bp, chain + | 890 | 0.0 |
Arabidopsis thaliana | blastx | AT1G70890.1 | Symbols: MLP43 | MLP-like protein 43 | chr1:26725912-26726489 REVERSE LENGTH=158 | 175 | 2e-44 |
Populus trichocarpa | blastx | POPTR_0010s12110.1|PACid:18241894 | 223 | 1e-58 |
Vitis vinifera | blastx | GSVIVT01011719001|PACid:17823515 | 169 | 1e-42 |
Ricinus communis | blastx | 29947.m000052|PACid:16814350 | 206 | 6e-54 |
InterProScan |
GO:0006952
Biological Process defense response |
GO:0009607
Biological Process response to biotic stimulus |
Sequence: FF534385_2_ORF1 Length: 157 aa | ||||||||||
InterPro IPR000916 Family |
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noIPR unintegrated |
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Sequence: FF534385_3_ORF2 Length: 86 aa | |
No hits reported. |
Sequence: FF534385_5_ORF2 Length: 60 aa | |
No hits reported. |
Sequence: FF534385_5_ORF3 Length: 83 aa | |
No hits reported. |