Sequence ID | FF381646 | |
Sequence Length | 685 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_020552 (FF381646) |
>FF381646 GAATAACGCAACGCATTGATGCACCAGCTCAAGTTGTATGGCCTTTCGTTCGAAGCTTTGAAAACCCACAAAAATACAAG CACTTCATCAAGAGTTGCAACATGAGAGGCACTGGTGGTATAGGAAGTATAAGAGAAGTTACAGTAGTTTCTGGCCTACC AGCTTCTACGAGCACTGAAAGGCTAGAGATTTTGGACGATGAGAAGCATATTTTAAGCTTTAGGGTGGTCGGAGGTGAAC ACCGGCTGAATAATTATCGGTCTGTAACATCGGTTAATGAGTTTTGTAAGGATGGAAAGATTTATACAATTGTTTTGGAG TCTTATATAGTTGATATACCAGAAGGAAATACTGGGGAGGATACGAAGATGTTTGTAGACACTGTTGTTAAGTTGAATCT TCAAAAGCTGGCTGTTGTAGCAATGGCTTCTGTGCATGGGCATGAATAATTATGATGGAGTGGTGGTGGTGGAAGTGGCG GTGGCAGGAGCCGTGATGATGATGGCTGCTGGGTTCTCATTGATATGATGATGTCTGATCTCAGTGGTTAGTATGGGGTT TTGCAAGTTGGGTTTTTTTATTTTGTTTTTCGTTTGTTATTTTATGAAGGCAATTAGTATTGGTTTGTATATTTTAATCT TAATATTGGGTAAGTTCAGTTACAAAGTTATGGGCTATTGTTTGG |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002516457.1| conserved hypothetical protein [Ricinus communis] gb|EEF45798.1| conserved hypothetical protein [Ricinus communis] | 278 | 5e-73 |
Manihot esculenta | blastn | cassava4.1_017054m|PACid:17972120 | 872 | 0.0 |
FGENESH CDS | blastn | scaffold00206_FGENESH1 1 exon (s) 10882 - 11448 567 bp, chain - | 872 | 0.0 |
Arabidopsis thaliana | blastx | AT2G26040.1 | Symbols: PYL2, RCAR14 | PYR1-like 2 | chr2:11094832-11095404 REVERSE LENGTH=190 | 215 | 2e-56 |
Populus trichocarpa | blastx | POPTR_0018s05090.1|PACid:18214736 | 262 | 2e-70 |
Vitis vinifera | blastx | GSVIVT01035362001|PACid:17840529 | 271 | 2e-73 |
Ricinus communis | blastx | 29794.m003335|PACid:16808696 | 278 | 2e-75 |
InterProScan |
GO:0006952
Biological Process defense response |
GO:0009607
Biological Process response to biotic stimulus |
Sequence: FF381646_1_ORF2 Length: 51 aa | |||||||
noIPR unintegrated |
|
Sequence: FF381646_3_ORF1 Length: 148 aa | ||||||||||
InterPro IPR000916 Family |
| |||||||||
noIPR unintegrated |
|
Sequence: FF381646_5_ORF2 Length: 74 aa | |||||||
noIPR unintegrated |
|
Sequence: FF381646_6_ORF2 Length: 78 aa | |
No hits reported. |