Home > Keyword search > FF381527

Summary
Sequence ID FF381527
Sequence Length 702 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  Mapped
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_020518 (FF381527)
 
 
Sequence
>FF381527
GTAAGGAATCGTGGGTATGGACTCGCAGCTGATATATGGAGCCTTGGATGTACTGTGTTGGAGATGTTAACCGGTCAACC
ACCATACTCTCACTTGGAAGGCATGCAAGCATTGTTCAGAATTGGCAGGGGTGAACCTCCTCCCGTACCTAAGTCGCTAT
CAGAAGACGCTCAGGATTTCATCTTTAAATGCCTACAAGTCAATTCAAATGATCGTCCAACGGCAACACAGCTGTTGAGT
CATCCATTTGTGAAGAGACCGCATCAAACCTTCTTGAGCCCTTATTCTCCTCGTTACAGCAGCTAAGAGACAAGAAAATT
TTTTACCAACGGCTAAAGAACATATGTCTTGATGATCAGGCAAATGATTGATCTTGCCAACCTCTTGTAATGTTCCCACG
GAGCAGATGCTGATCTCGTAAGAACCGAGGATGCATCTCTTTCATATGTGTTTCATACTTATTGGCCTTGAGAGTTACAC
ATTTTCATGTGAGGTATGCAATTTCTAGAATTGGTTCCCCTTTTCTGCAATGGAAGTTATATTGATTTTGCGGGTAAGGC
CAACTGAAAAGTCTGAGACGAGCCAGCACTTACTCATACTCACCTTTTAGACTTACTTGGGTATTGAGCATTTACCTGTC
AAAATGAATTCCTTGCAATGGATAATTGCAGCTCAAATTGTAAATAATTATGGTAATTAAGA

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002534356.1| Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis] gb|EEF28029.1| Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis] 175 6e-42
  Manihot esculenta blastn  cassava4.1_003875m|PACid:17992435 605 1e-172
  FGENESH CDS blastn  scaffold05979_FGENESH18 2 exon (s) 132262 - 132803 267 bp, chain + 404 1e-112
  Arabidopsis thaliana blastx  AT4G08500.1 | Symbols: MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MAPK/ERK kinase kinase 1 | chr4:5404272-5407062 REVERSE LENGTH=608 122 3e-28
  Populus trichocarpa blastx  POPTR_0005s16210.1|PACid:18206854 145 4e-35
  Vitis vinifera blastx  GSVIVT01023079001|PACid:17831673 162 1e-40
  Ricinus communis blastx  28567.m000054|PACid:16801123 175 2e-44
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: FF381527_1_ORF1  Length: 101 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[4-83]T 4e-26 PD000001 Q7XQ43_EEEEE_Q7XQ43;Q7XQ43_EEEEE_Q7XQ43;
PS50011[1-84]T 16.839 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[1-99]T 2.1e-25 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[1-84]T 4.8e-28 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[1-99]T 1.1e-21 G3DSA:1.10.510.10 no descriptionno description
PTHR22986[1-87]T 2e-42 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF63[1-87]T 2e-42 PTHR22986:SF63 MITOGEN ACTIVATED PROTEIN KINASE-RELATEDMITOGEN ACTIVATED PROTEIN KINASE-RELATED
Sequence: FF381527_2_ORF1  Length: 55 aa
No hits reported.
Sequence: FF381527_3_ORF2  Length: 52 aa
No hits reported.
Sequence: FF381527_4_ORF2  Length: 78 aa
No hits reported.