Sequence ID | FF381255 | |
Sequence Length | 723 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | - | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_020446 (FF381255) |
>FF381255 GCTAATTATTACTCTCTTCATTTGCTTTGTTTCAACTTTCAAAGTTAGCTGAAATGGCATATGTCACTGCCAATGCTGGA GTTAAAGTTCAAATCAAGAGTCAATCAAATGATTTCTGGAATGCTATTACCAATAACCAATTTCTTGTTGATGCCATTCC TGACCTATATGAATCAATAGTTTTTCCAACTCCTAGTAATCTTCAAGTGCGCAAAATCACGTATGGCCCAAGTTCTCAAA ACATCAAAACCTCGACTGAACGTGTCATTGAGAACAGTGATGAGAAATTTATTTACACTGTAGTTGCTGGTGACATCCTT ACCAAATATGAAGTCAGCGACTTTCGAGCTACGATAAGTTACCCTGCTGACAAATGGGTGGAATGGACCTGGACCTATAA ATATTTGAAGGACGGGAAAAGCAAGGCTCTTGACCTTGATGTAGAGATCGCAGACATTGTGCTTAAGAGCCTATCAAAAC TTGATGCCTTTATTCAAAAGAAGAAACTCTGAATTGCATGTTTACTGTTGCACGTCTCTGTGTGGTATGCTAAATAAAGC AGAATCCTACTTCTGCTTAACGCTCTATGTTTTATCCTAGTCGTGTTTGTGTTATGCTTGCTACGTGTTGTATTAAATAA AGCAGAGTCCTATCGTGCTTAATGCTCTGCACTTTATTTGCTTGTATTAAAATAAAAATCCAACTTTAGTTGCTTGTTCT TCC |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002531397.1| conserved hypothetical protein [Ricinus communis] gb|EEF30981.1| conserved hypothetical protein [Ricinus communis] | 91.7 | 9e-17 |
Manihot esculenta | blastn | cassava4.1_018318m|PACid:17992756 | 791 | 0.0 |
FGENESH CDS | blastn | scaffold02618_FGENESH4 2 exon (s) 49171 - 49738 459 bp, chain + | 791 | 0.0 |
Arabidopsis thaliana | blastx | AT1G24020.2 | Symbols: MLP423 | MLP-like protein 423 | chr1:8500653-8501458 REVERSE LENGTH=155 | 51.6 | 5e-07 |
Populus trichocarpa | blastx | POPTR_0010s10600.1|PACid:18240309 | 55.5 | 4e-08 |
Vitis vinifera | blastx | GSVIVT01020183001|PACid:17829649 | 57.4 | 6e-09 |
Ricinus communis | blastx | 29168.m000374|PACid:16802390 | 91.7 | 3e-19 |
InterProScan |
GO:0006952
Biological Process defense response |
GO:0009607
Biological Process response to biotic stimulus |
Sequence: FF381255_1_ORF2 Length: 51 aa | |
No hits reported. |
Sequence: FF381255_3_ORF1 Length: 168 aa | ||||||||||
InterPro IPR000916 Family |
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noIPR unintegrated |
|
Sequence: FF381255_5_ORF2 Length: 51 aa | |
No hits reported. |
Sequence: FF381255_6_ORF2 Length: 98 aa | |
No hits reported. |