Sequence ID | DV457011 | |
Sequence Length | 469 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_019597 (DV457011) |
>DV457011 TCAAGATTTGGCACTACACTTTAGATGGGAAATCTGGGGTGTTCAAAGAGCGAATCGAAATCGATGAAGAGAATAAAATA GTAAAGCTTATTGGTTTGGAAGGTGATGTGTTCAAGTTTTACAAGGTGTATAATGGAATCTGGCACATTACGCCCAAACC TGAAGGTTGCTCGGCGAAATTGACTATTGAATATGAGAAGCTAAACGAGACTTCCCCAGATCCTCATATTTACTTGGATT TCATTACTAGAATGACCAAGGATATCGATGCAGGCCTTGTGCAGGCTTAATATATATGCTGGCCATCAGAAGATGATCCA TAAATCTTCTATATGTCTTCATAATAAAAGCATATGTTAAAAGCTGCATGCTCATTTGGGTTATGTAATGTGAGTGGTTT TTAATTATGTGTTGTTGATTATGGTGTCCTGTAAAAGTATTAATGAAATCAATGAGAAGCTTTGATTGC |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002526036.1| Major latex protein, putative [Ricinus communis] gb|EEF36376.1| Major latex protein, putative [Ricinus communis] | 139 | 2e-31 |
Manihot esculenta | blastn | cassava4.1_018302m|PACid:17969713 | 527 | 1e-149 |
FGENESH CDS | blastn | scaffold04716_FGENESH16 2 exon (s) 90651 - 91203 459 bp, chain - | 527 | 1e-149 |
Arabidopsis thaliana | blastx | AT3G26450.1 | Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr3:9681593-9683299 REVERSE LENGTH=152 | 85.1 | 2e-17 |
Populus trichocarpa | blastx | POPTR_0008s13040.1|PACid:18248841 | 124 | 2e-29 |
Vitis vinifera | blastx | GSVIVT01011726001|PACid:17823517 | 87.4 | 3e-18 |
Ricinus communis | blastx | 29816.m000695|PACid:16809607 | 139 | 8e-34 |
InterProScan |
GO:0006952
Biological Process defense response |
GO:0009607
Biological Process response to biotic stimulus |
Sequence: DV457011_3_ORF1 Length: 95 aa | ||||||||||
InterPro IPR000916 Family |
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noIPR unintegrated |
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Sequence: DV457011_4_ORF1 Length: 73 aa | |
No hits reported. |
Sequence: DV457011_6_ORF2 Length: 59 aa | |
No hits reported. |