Sequence ID | DV456501 | |
Sequence Length | 529 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_019502 (DV456501) |
>DV456501 TCAGCGATTGGCAAGTTCAAAAGAACCTTCACTGAAAGATCTACAGGAATTAGCAGCTCGACTCTTCTCTAAAGGCAAGG CAAAACCTGAAGGAACACAGAATGCAAATGCAGAAGCTGAAAACAAGAAGAAGCAACAAAATAAGGAATACAATTCAAAT GCGAATTTAAGCCCGCTTGCGAGGTTTTTACTCTCGAGATGGCAAAGCCAAGTTTCAAGGGACGTCAATCCAACTTAAAA GAGGAGGTTGGAGCTGGGTCACAACTTCGTTTATTAGCGTGTTTCTTTTCTTTTTATGCTTTCTCTCAGTTTTGATGTAC ATAACATTGTAAGAAATTGTGCATTTATTATCTATTATCTATTATTTATTATGATTATTTTTTTCCCTTTCTATAGTTTT ATTTGCAGGGGCGAATTGCTGTATAATTAGGGGTTTGCTATTGGCATATTAACAATGTAATTTTAGCATAACATTAATTG TATTTATTAATACATTTTGGTAAAAAATTTTGTTAGTAACGTTTGTCCC |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002285128.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] | 121 | 5e-26 |
Manihot esculenta | blastn | cassava4.1_002731m|PACid:17987207 | 472 | 1e-132 |
FGENESH CDS | blastn | scaffold03741_FGENESH97 19 exon (s) 653894 - 664333 2040 bp, chain - | 472 | 1e-132 |
Arabidopsis thaliana | blastx | AT1G53165.3 | Symbols: ATMAP4K ALPHA1 | Protein kinase superfamily protein | chr1:19814386-19819233 FORWARD LENGTH=688 | 79.0 | 2e-15 |
Populus trichocarpa | blastx | POPTR_0001s40800.2|PACid:18236900 | 120 | 6e-28 |
Vitis vinifera | blastx | GSVIVT01014297001|PACid:17825312 | 121 | 2e-28 |
Ricinus communis | blastx | 29768.m000106|PACid:16808243 | 111 | 2e-25 |
InterProScan |
No hits found |
Sequence: DV456501_1_ORF2 Length: 56 aa | |
No hits reported. |
Sequence: DV456501_2_ORF1 Length: 78 aa | ||||||||||
noIPR unintegrated |
|
Sequence: DV456501_2_ORF2 Length: 50 aa | |||||||
noIPR unintegrated |
|
Sequence: DV456501_3_ORF2 Length: 53 aa | |||||||
noIPR unintegrated |
|
Sequence: DV456501_4_ORF2 Length: 77 aa | |||||||
noIPR unintegrated |
|
Sequence: DV456501_6_ORF2 Length: 51 aa | |
No hits reported. |