Home > Keyword search > DV452766

Summary
Sequence ID DV452766
Sequence Length 696 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  Mapped
Gbrowse Ath  Mapped
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_018750 (DV452766)
 
 
Sequence
>DV452766
CCAACTTCCAAGTTCCAACAAATTTCAGCAATGGACGGTGGCGGACCGGGCCAGCCGGCGGACACTGATATGGAGGATGC
GGCTGCCGCTGCTGCTCCACCACCACCGTCTGACTCCCAACAGCACCACGCCCCTACCGGAGGCATAGATAATATTCCGG
CCACTCTTAGCCATGGAGGGATATTCATACAATATAACATTTTCGGTAACATATTTGAGGTTACTGCCAAGTATAAGCCT
CCTATCATGCCCATCGGCAAAGGCGCCTACGGCATTGTTTGCTCGGCTCTGAATTCGGAGACCGGTGAGAATGTGGCGAT
AAAGAAAATAGCAAATGCTTTTGATAATAAAATCGATGCCAAGAGGACACTCCGTGAGATCAAGTTGCTTCGTCATATGG
ATCATGAAAACGTCAGTTGTGGCAATCAGGGATATAATCCCCCCACCCCAAAGGGAATCATTTAATGATGTTTACATAGC
TTATGAGCTAATGGACACTGATCTCCATCAGATCATTCGTTCCAATCAAGCACTATCTGAGGAGCATTGTCAGTATTTCC
TCTATCAAATTCTCCGAGGATTGAAATATATACATTCTGCAAATGTTCTCCACAGAGATTTAAAACCAAGTAATCTCCTT
TTGAATGCAAATTGTGACTTGAAGATATGTGACTTTGGTCTGGCTCGCGTTACCTC

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  gb|ACG37232.1| MPK6 - putative MAPK [Zea mays] 194 2e-96
  Manihot esculenta blastn  cassava4.1_022556m|PACid:17965248 761 0.0
  FGENESH CDS blastn  scaffold04475_FGENESH6 3 exon (s) 54893 - 55449 426 bp, chain + 767 0.0
  Arabidopsis thaliana blastx  AT1G07880.2 | Symbols: ATMPK13 | Protein kinase superfamily protein | chr1:2434193-2435712 REVERSE LENGTH=363 160 8e-73
  Populus trichocarpa blastx  POPTR_0009s07050.1|PACid:18228123 173 2e-82
  Vitis vinifera blastx  GSVIVT01025091001|PACid:17833154 169 8e-77
  Ricinus communis blastx  28752.m000329|PACid:16801654 170 2e-76
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: DV452766_1_ORF1  Length: 154 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[84-148]T 2e-24 PD000001 Q84UI5_EEEEE_Q84UI5;Q84UI5_EEEEE_Q84UI5;
PS50011[79-154]T 9.687 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[58-138]T 3.8e-12 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017441
Conserved_site
Protein kinase ATP binding, conserved site
PS00107[85-109]T 8e-5 PS00107 PROTEIN_KINASE_ATPPROTEIN_KINASE_ATP
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[84-138]T 2e-12 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:3.30.200.20[49-138]T 2.8e-19 G3DSA:3.30.200.20 no descriptionno description
PTHR11295[48-138]T 5.4e-58 PTHR11295 CDC2, MAP KINASE-RELATEDCDC2, MAP KINASE-RELATED
PTHR11295:SF69[48-138]T 5.4e-58 PTHR11295:SF69 MITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATEDMITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATED
seg[26-45]? NA seg segseg
Sequence: DV452766_2_ORF2  Length: 121 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[28-180]T 5e-28 PD000001 Q8H0B3_NICBE_Q8H0B3;Q8H0B3_NICBE_Q8H0B3;
PS50011[1-121]T 21.842 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR002290
Domain
Serine/threonine protein kinase
SM00220[1-121]T 0.00079 SM00220 no descriptionno description
InterPro
IPR008271
Active_site
Serine/threonine protein kinase, active site
PS00108[92-104]T 8e-5 PS00108 PROTEIN_KINASE_STPROTEIN_KINASE_ST
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[29-120]T 1.2e-29 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[42-120]T 7e-30 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[40-120]T 1.2e-25 G3DSA:1.10.510.10 no descriptionno description
PTHR11295[29-121]T 1.1e-74 PTHR11295 CDC2, MAP KINASE-RELATEDCDC2, MAP KINASE-RELATED
PTHR11295:SF69[29-121]T 1.1e-74 PTHR11295:SF69 MITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATEDMITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATED
Sequence: DV452766_4_ORF2  Length: 148 aa
noIPR
unintegrated
unintegrated
seg[121-131]? NA seg segseg
Sequence: DV452766_6_ORF2  Length: 58 aa
No hits reported.
Sequence: DV452766_6_ORF3  Length: 60 aa
No hits reported.