Home > Keyword search > DV450614

Summary
Sequence ID DV450614
Sequence Length 642 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  -
Gbrowse Vvi  -
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_018317 (DV450614)
 
 
Sequence
>DV450614
GATGAATTGCCAGAAATCCCTCAAGAATTGTCCCAAGAGGCGAAGGATTTTCTATCCAAGTGTTTTGTTAAGGATCCTAG
AAAGAGATGGACGGCTGATTTGCTATTAAATCATCCTTTTATTGCTAATGAAACCACTGTTACATTGAAGGAGAAGGAGC
AATTATCTCCATCATCATCACCCAGATGTCCATTTGAGTTTCCAGAGTGGGTTTCAGTTCCATCTTCATCACCGAAATCT
GAATTATGGTCTAACAAGGAAGTAGAATCAAGATTTGATTGGTCCTCTTTGTCATATTCGCCTTCGCCGGCAGAGAGACT
CCGACAGCTGGGGAGTGATGAGGGATGCAACTGGTCATTTTCTGAGAGTTGGGTGACTGTGAGGTGAGAGGAAGCAGGCA
GAGCACATAATTGAATTCAACAGCAGCAAATTTAGATGAATTTTTTAATTCTATGTTTGTTCACAGTCTAACTTGTTGAG
ATTCCATTAATCCTTTTAGGAATTGGTGACAATTTTTTGGAGATTGTAAATGTGTAGGAAACAGACTGAGAAATTGTATT
TAGCAGACTGGCCAAGTGTACAGAACACTGTTTTAAATTTTAACCCCTTTTAATTGAATGCAGAGAAAGTAATTTTCCAG
GA

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002523600.1| ATP binding protein, putative [Ricinus communis] gb|EEF38795.1| ATP binding protein, putative [Ricinus communis] 193 2e-47
  Manihot esculenta blastn  cassava4.1_010778m|PACid:17992966 767 0.0
  FGENESH CDS blastn  scaffold03060_FGENESH37 2 exon (s) 304624 - 305905 1128 bp, chain + 761 0.0
  Arabidopsis thaliana blastx  AT5G67080.1 | Symbols: MAPKKK19 | mitogen-activated protein kinase kinase kinase 19 | chr5:26772726-26773760 FORWARD LENGTH=344 117 6e-27
  Populus trichocarpa blastx  POPTR_0007s10930.1|PACid:18242944 151 3e-37
  Vitis vinifera blastx  GSVIVT01022117001|PACid:17831030 136 7e-33
  Ricinus communis blastx  30115.m001222|PACid:16818001 193 6e-50
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: DV450614_1_ORF1  Length: 128 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-40]T 5e-14 PD000001 Q9FHA5_ARATH_Q9FHA5;Q9FHA5_ARATH_Q9FHA5;
PS50011[1-41]T 8.655 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[4-72]T 1.1e-10 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[9-41]T 1.1e-10 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[3-43]T 2.6e-05 G3DSA:1.10.510.10 no descriptionno description
PTHR22986[2-77]T 8.3e-21 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF58[2-77]T 8.3e-21 PTHR22986:SF58 MITOGEN ACTIVATED PROTEIN KINASE-RELATEDMITOGEN ACTIVATED PROTEIN KINASE-RELATED
Sequence: DV450614_5_ORF2  Length: 69 aa
No hits reported.
Sequence: DV450614_6_ORF2  Length: 101 aa
No hits reported.