Home > Keyword search > DV449774

Summary
Sequence ID DV449774
Sequence Length 586 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  Mapped
Gbrowse Ath  Mapped
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_018162 (DV449774)
 
 
Sequence
>DV449774
CTTAGTAATGACCACTGCCAATACTTCCTATTCCAGTTGCTTNNNGGTTTGAAGTATCTTCACTCAGCAAACATTCTCCA
CCNNNACTTGAAGCCTGGGAATCTACTTATCAATGCAAACTGTGATCTAAAAATATGTGATTTTGGGCTTGCACGTACTA
TCAATGGCAAGGGCCAATTCATGACGGAGTATGTTGTCACTCGCTGGTATCGAGCTCCAGAACTACTCCTATGCTGTGAT
AATTATGGGACTTCCATTGATGTCTGGTCCGTCGGATGTATCTTTGCAGAGCTTCTCGGCCGGAAACCTATCTTCCCAGG
CACAGAGTGTCTCAACCAGCTTAAACTTATCATCAACATCCTTGGCAGCCAGAGGGAGGAGGATCTAGAATTTATTGATA
ACCCTAAGGCTAAGAAATACATCAAGTCACTTCCATATTCTCCTGGTACCCCATTTTCTCGCCTTTACCCTAATGCCCAT
CCTTTGGCAATTGATCTGCTTGGTAAAATGCTTGTTTTTGACCCATCAAATAGNATAACTGTAACTGAAGCACTCCAACA
CCCTTNGCATGTCCCCACTTTATGAT

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002510434.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF52621.1| big map kinase/bmk, putative [Ricinus communis] 373 1e-102
  Manihot esculenta blastn  cassava4.1_009941m|PACid:17969422 1067 0.0
  FGENESH CDS blastn  scaffold10524_FGENESH19 2 exon (s) 174185 - 177150 1119 bp, chain + 1067 0.0
  Arabidopsis thaliana blastx  AT1G59580.2 | Symbols: ATMPK2, MPK2 | mitogen-activated protein kinase homolog 2 | chr1:21884521-21885743 FORWARD LENGTH=376 352 1e-97
  Populus trichocarpa blastx  POPTR_0002s03340.1|PACid:18244597 362 1e-100
  Vitis vinifera blastx  GSVIVT01025091001|PACid:17833154 254 3e-68
  Ricinus communis blastx  30170.m013789|PACid:16821634 373 1e-104
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: DV449774_1_ORF1  Length: 194 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-114]T 2e-60 PD000001 MPK2_ARATH_Q39022;MPK2_ARATH_Q39022;
PS50011[1-190]T 30.082 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR002290
Domain
Serine/threonine protein kinase
SM00220[1-190]T 8.9e-14 SM00220 no descriptionno description
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[1-190]T 8.6e-52 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[1-188]T 7.5e-56 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[1-188]T 1.2e-54 G3DSA:1.10.510.10 no descriptionno description
PTHR11295[1-121]T 2.8e-88 PTHR11295 CDC2, MAP KINASE-RELATEDCDC2, MAP KINASE-RELATED
PTHR11295:SF69[1-121]T 2.8e-88 PTHR11295:SF69 MITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATEDMITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATED
Sequence: DV449774_2_ORF2  Length: 67 aa
noIPR
unintegrated
unintegrated
seg[48-60]? NA seg segseg
Sequence: DV449774_4_ORF2  Length: 51 aa
No hits reported.
Sequence: DV449774_6_ORF2  Length: 73 aa
No hits reported.
Sequence: DV449774_6_ORF3  Length: 60 aa
No hits reported.