Home > Keyword search > DV448746

Summary
Sequence ID DV448746
Sequence Length 762 nucleotides
Gbrowse Mes  -
Gbrowse Rco  -
Gbrowse Ptr  -
Gbrowse Vvi  -
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_017866 (DV448746)
 
 
Sequence
>DV448746
CAATCTCGATGAGTGATTTGGAAACACTACNNNAACTTGGAAAAGGCCAATTTGGAATTGTTGAACAAATGTTGCATAAA
CCATCCAATCTTGTATTCGCAGTAAAACAGTTACGATGTTCAAAGGATGATAAAAAACAGGATAGAATTCTAAATGACCT
CAACTTAAGCATGAGAAGTACCCAATGTCCTTACGTTGTTGTAAGCTATGGAGCAATGCATCGTGGAGGTGACGTATGGA
TTTGCATGGAGATATTGGATTCCAGTTTAGACAAATTTTATAAACTAGTGAGTGCTATTGGTACTGAATCTTTCATTCCA
GAAATGATGTTAGCATACATTACATTTTGCATTGTCACTGCTCTTGAATATTTGCATCAAGCTCTTCGTGTCATACACAG
GGATTCAAACCGAGTAATGTTTTAATAGACAAATCGGGTAGAGTGAAAGTTTGCGATTTTGGAATATCCGGAACTCTTGT
CAATTCAGTTGCTCAAACAAATTTGGGAACTCAGTCATATCTTGCTCCTGAACGAATCATTACAGAAAATAGTACCTCTG
GTTTTACAATTCGCTCTGATGTTTGGTCACTCGGACTGTCAATTCTTGAATTAGCAATTTTAAAATTTCCTTATCCTCTG
GATATTTCTCTATACAATCTAATTACATATGTTACAGAAGGACCGCCTCCTTCTCTGCCAGNAAATTCAAGCTATTCCAA
TACGGTCCGAAATTTTATTTCTCGATGTCTTGTTATTGCTGT

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_972852.1| PREDICTED: similar to licorne CG12244-PA [Tribolium castaneum] gb|EFA08029.1| hypothetical protein TcasGA2_TC005618 [Tribolium castaneum] 147 2e-60
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx  AT5G56580.1 | Symbols: ATMKK6, ANQ1, MKK6 | MAP kinase kinase 6 | chr5:22904851-22906620 REVERSE LENGTH=356 92.8 1e-35
  Populus trichocarpa blastx  POPTR_0018s06810.1|PACid:18214994 87.8 5e-33
  Vitis vinifera blastx  GSVIVT01015155001|PACid:17825956 82.0 9e-33
  Ricinus communis blastx  29912.m005307|PACid:16813186 84.7 7e-35
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: DV448746_1_ORF2  Length: 51 aa
No hits reported.
Sequence: DV448746_2_ORF2  Length: 131 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[14-105]T 6e-23 PD000001 Q8K2U0_MOUSE_Q8K2U0;Q8K2U0_MOUSE_Q8K2U0;
PS50011[1-131]T 21.319 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[14-130]T 9.3e-24 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[14-128]T 5e-21 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[14-130]T 5.1e-20 G3DSA:1.10.510.10 no descriptionno description
PTHR22986[14-128]T 1.9e-43 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF42[14-128]T 1.9e-43 PTHR22986:SF42 MITOGEN ACTIVATED PROTEIN KINASE KINASE-RELATEDMITOGEN ACTIVATED PROTEIN KINASE KINASE-RELATED
seg[106-118]? NA seg segseg
Sequence: DV448746_3_ORF1  Length: 140 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[12-134]T 4e-31 PD000001 MPK6_HUMAN_P52564;MPK6_HUMAN_P52564;
PS50011[6-140]T 16.782 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR002290
Domain
Serine/threonine protein kinase
SM00220[6-140]T 0.00043 SM00220 no descriptionno description
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[1-134]T 1.3e-22 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017441
Conserved_site
Protein kinase ATP binding, conserved site
PS00107[12-35]T 8e-5 PS00107 PROTEIN_KINASE_ATPPROTEIN_KINASE_ATP
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[6-134]T 1.7e-15 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:3.30.200.20[1-86]T 6.9e-19 G3DSA:3.30.200.20 no descriptionno description
PTHR22986[5-134]T 8.8e-51 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF37[5-134]T 8.8e-51 PTHR22986:SF37 MITOGEN ACTIVATED PROTEIN KINASE KINASE 3, MAPKK3, MEK3MITOGEN ACTIVATED PROTEIN KINASE KINASE 3, MAPKK3, MEK3
Sequence: DV448746_3_ORF2  Length: 55 aa
No hits reported.
Sequence: DV448746_4_ORF2  Length: 53 aa
No hits reported.
Sequence: DV448746_5_ORF2  Length: 63 aa
No hits reported.