Home > Keyword search > DV445351

Summary
Sequence ID DV445351
Sequence Length 635 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  Mapped
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_016982 (DV445351)
 
 
Sequence
>DV445351
CCTGATGATGCTAGCCTTGGATTTCTCCGAAGTGATAATGCTCGAAGATATTTTAGACAGCTTCCAAAATACAAAAAGCA
GAACTTCTCAGTGAGGTTTCCTAATGTGTCTCCTGGAGCTGCTGATCTGCTGGAAAAGATGCTTGTTTTTGATCCCAATA
AGCGCATTACAGTTGATGAGGCACTTTGTCACCCATACTTGTCATCCCTTCATGACATCAACAACGAGCCTGTCTGTCCC
AGGCCTTTCCATTTTGATTTTGATCACCCATCATGTACTGAAGAGCACATCAAGGAGCTCATCTGGAGGGAATCAGTGAA
GTTCAATCCGGATCCTCCAGCTTATTAGGAGGAACACATTGGGAAGAGGGATAATATCTTTCCCTTGACCACACTATTGT
CTATCAGCATTTCCTGGGAGTACCTGAACCTCGCATTCGTAGACTATGAAACGTGAAGTTCAAGGGCTATGGGTGCTTCT
AGTTTTATCCATTAAGTGCATATCTTCTGTAAGTAGTAGTACTAGTTGGGAGTTTTAGGGGTAGGAGCATATGAAAGATT
GAGGCATTAAGCATGTTGTGTTGCTCATGGATCTGATTTCTATTTGCCATATCTATAATATCTATTTATCTATAT

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002509851.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF51238.1| big map kinase/bmk, putative [Ricinus communis] 228 6e-58
  Manihot esculenta blastn  cassava4.1_009716m|PACid:17961498 682 0.0
  FGENESH CDS blastn  scaffold10173_FGENESH8 7 exon (s) 125441 - 128569 1242 bp, chain - 682 0.0
  Arabidopsis thaliana blastx  AT4G01370.1 | Symbols: ATMPK4, MPK4 | MAP kinase 4 | chr4:567219-568889 FORWARD LENGTH=376 188 2e-48
  Populus trichocarpa blastx  POPTR_0003s13170.1|PACid:18218342 221 3e-58
  Vitis vinifera blastx  GSVIVT01019406001|PACid:17829033 198 1e-51
  Ricinus communis blastx  30190.m011265|PACid:16823622 228 2e-60
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
detail
Sequence: DV445351_1_ORF1  Length: 115 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-66]T 3e-09 PD000001 Q7YZU3_SUBDO_Q7YZU3;Q7YZU3_SUBDO_Q7YZU3;
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[15-98]T 5.3e-11 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[32-67]T 3.4e-12 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
PD054205[71-108]T 2e-14 PD054205 Q84XZ6_PETCR_Q84XZ6;Q84XZ6_PETCR_Q84XZ6;
G3DSA:1.10.510.10[13-110]T 4.3e-09 G3DSA:1.10.510.10 no descriptionno description
PTHR22982[30-65]T 2.7e-07 PTHR22982 CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATEDCALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED
PTHR22982:SF13[30-65]T 2.7e-07 PTHR22982:SF13 CALCIUM-DEPENDENT PROTEIN KINASECALCIUM-DEPENDENT PROTEIN KINASE
Sequence: DV445351_2_ORF2  Length: 74 aa
No hits reported.
Sequence: DV445351_6_ORF2  Length: 60 aa
No hits reported.