Home > Keyword search > DV445163

Summary
Sequence ID DV445163
Sequence Length 701 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  Mapped
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_016934 (DV445163)
 
 
Sequence
>DV445163
ACATCCGGCAACTAAGTCAATATCCTCGTCAGCCTTTAGCCCAAGTTTTTCCTCATGTTAATCCTTTGGCCATTGATCTT
ATTGATAGAATGTTAACATTTGATCCCACCAGAAGAATTTCTGTTGAAGAAGCATTAGCGCATCCGTACCTGGCAAGGTT
ACATGATGTAGCTGATGAACCAGTGTGCCCAGTTCCATTCACTTTTGATTTTGAGCAACAGCCCTTGGGAGAAGAACAGA
TGAAGGAAATGATTTACAGAGAGGCTTTAGCACTCAATCCTGAGTATGCATAATGGAGAAAGTAGATATGTTACTTGGTA
TAATATTCATTTATTGTTCAAATGTTGTTTGATAGAAAAGAGCTGTGGATGAAACAATGCAACCCTAAGAGAGAAATCAT
TTTGAACAACAAGGCGGGTCACTGATCAAACAAGTCACATCCCTTTGATTGTCTTCTGTCCTTGTCACGGGCGTGCTGAT
TTTGCACCCATCAGTACCCATCAGCTGTACACTACCTTACAATCTTTATGAGGTTAGTCACCTTACAGCCTTCATATGAC
TAAGAATTTCTTTTATTTTTCTCACTTCCTCTTGTAAGATTTGCTGATTTGTGATTTTTTTTTTTGAAATTTGAACTATT
CTCAATGTAGTTAATGCTTATTGTGTGCAATAGATTGAATACAAATGTAAACTGTTGCTTG

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002532266.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF30132.1| big map kinase/bmk, putative [Ricinus communis] 181 1e-43
  Manihot esculenta blastn  cassava4.1_010219m|PACid:17991685 565 1e-160
  FGENESH CDS blastn  scaffold00506_FGENESH14 6 exon (s) 136535 - 139831 1176 bp, chain - 565 1e-160
  Arabidopsis thaliana blastx  AT3G45640.1 | Symbols: ATMPK3, MPK3, ATMAPK3 | mitogen-activated protein kinase 3 | chr3:16756918-16758476 FORWARD LENGTH=370 151 3e-37
  Populus trichocarpa blastx  POPTR_0009s07050.1|PACid:18228123 160 1e-39
  Vitis vinifera blastx  GSVIVT01025105001|PACid:17833161 160 5e-40
  Ricinus communis blastx  29688.m000269|PACid:16805869 181 4e-46
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: DV445163_3_ORF1  Length: 96 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-49]T 8e-07 PD000001 Q7YZU3_SUBDO_Q7YZU3;Q7YZU3_SUBDO_Q7YZU3;
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[16-81]T 1.1e-10 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR015742
Domain
Calcium/calmodulin-dependent protein kinase II isoform
PTHR22982:SF64[19-57]T 8.5e-08 PTHR22982:SF64 CALCIUM/CALMODULIN DEPENDENT PROTEIN KINASE IICALCIUM/CALMODULIN DEPENDENT PROTEIN KINASE II
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[15-50]T 1.1e-10 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
PD054205[54-89]T 4e-12 PD054205 Q9LKZ2_CAPAN_Q9LKZ2;Q9LKZ2_CAPAN_Q9LKZ2;
G3DSA:1.10.510.10[4-93]T 4.5e-09 G3DSA:1.10.510.10 no descriptionno description
PTHR22982[19-57]T 8.5e-08 PTHR22982 CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATEDCALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED
Sequence: DV445163_5_ORF2  Length: 66 aa
noIPR
unintegrated
unintegrated
seg[6-17]? NA seg segseg