Summary
| Sequence ID | DV443323 | |
| Sequence Length | 623 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | Mapped | |
| Gbrowse Ptr | Mapped | |
| Gbrowse Vvi | Mapped | |
| Gbrowse Ath | Mapped | |
| Corresponding scaffold | - | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_016463 (DV443323) |
| >DV443323 CTTTCCATTCGGATGTTGTGGTTGATTTGGTGTGTTACCGTCGATTTGGACATAATGAGATTGATGAGCCATCATTCACG CAGCCAAAAATGTATCAGGTTATTCGAAATCATCCCTCATCTCTTGAGATTTACAGAAAGAGACTTTTAGAATCTGGCCA GGTGGGTGAAGAAGATATTCAAAAGATACAAGAGAAGGTCAATTCGATTCTCAACGAAGAATTCTTGGCTAGCAAAGATT ATGTTCCTAAAAGAAGAGATTGGCTTTCATCTCATTGGGCTGGGTTTAAGTCACCTGAACAGCTTTCACGTATCCGAAAC ACTGGGGTGAAACCTGAGATCTTGAAGAATGTTGGCAAGGCAATCACAACTTTTCCTGATAATTTTAAGCCTCACAGAGG TGTAAAGAAGGTTTATGAACAACGTGCACAAATGATTGAAACTGGGGAAGGAATTGATTGGGCAGTTGCAGAAGCTCTTG CCTTTGCCACTTTGGTTGTAGAAGGTAATCATGTTAGATTGAGTGGCCAGGATGTTGAAAGAGGTACATTTAGTCACCGG CATTCAGTCGTTCATGATCAAGAAACTGGGGAAAAGTATTGTCCTCTGGACCATCTTGTCATT |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] gb|EEF33948.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] | 402 | 1e-110 |
| Manihot esculenta | blastn | cassava4.1_000822m|PACid:17992054 | 1227 | 0.0 |
| FGENESH CDS | blastn | scaffold03440_FGENESH1 8 exon (s) 5263 - 9984 3117 bp, chain + | 1227 | 0.0 |
| Arabidopsis thaliana | blastx | AT5G65750.1 | Symbols: | 2-oxoglutarate dehydrogenase, E1 component | chr5:26304212-26307947 FORWARD LENGTH=1025 | 380 | 1e-106 |
| Populus trichocarpa | blastx | POPTR_0010s21610.1|PACid:18240622 | 399 | 1e-112 |
| Vitis vinifera | blastx | GSVIVT01016597001|PACid:17826992 | 374 | 1e-104 |
| Ricinus communis | blastx | 29585.m000607|PACid:16803171 | 402 | 1e-113 |
| InterProScan |
| GO:0004591
Molecular Function oxoglutarate dehydrogenase (succinyl-transferring) activity |
| GO:0006096
Biological Process glycolysis |
| GO:0030976
Molecular Function thiamin pyrophosphate binding |
| Sequence: DV443323_1_ORF1 Length: 49 aa | |
| No hits reported. | |
| Sequence: DV443323_1_ORF2 Length: 59 aa | |
| No hits reported. | |
| Sequence: DV443323_3_ORF1 Length: 207 aa | ||||||||||
| InterPro IPR001017 Domain |
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| InterPro IPR005475 Domain |
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| InterPro IPR011603 Family |
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| noIPR unintegrated |
| |||||||||
![[1-85]T 2.4e-14 PF00676 E1_dh](http://pmix.psc.riken.jp/img/interpro/H.gif){kind=small}
![[1-205]T 2e-105 PTHR23152 2-OXOGLUTARATE DEHYDROGENASE](http://pmix.psc.riken.jp/img/interpro/X4.gif){kind=small}
![[1-93]T 2.7e-15 G3DSA:3.40.50.970 no description](http://pmix.psc.riken.jp/img/interpro/X2.gif){kind=small}
![[1-128]T 5.5e-21 SSF52518 Thiamin diphosphate-binding fold (THDP-binding)](http://pmix.psc.riken.jp/img/interpro/B.gif){kind=small}
| Sequence: DV443323_6_ORF2 Length: 85 aa | |
| No hits reported. | |
