Sequence ID		DV442880
Sequence Length		727 nucleotides
Gbrowse Mes
Gbrowse Rco		Mapped
Gbrowse Ptr		Mapped
Gbrowse Vvi		Mapped
Gbrowse Ath		Mapped
Corresponding scaffold		-
Related probe ID of RIKEN ver.1 microarray		R_Mes01_016367 (DV442880)

>DV442880 GGAGGGTTGAAGCCATTTTGCATAATTCCTTCTGCCTTTCTACAGAGAGCATATGACCAGGTGATCCATGATGTAGATCA ACAGAAGATTCCAGTTCGTTTTGTCATTTCAAGTGCAGGATTGGTAGGGTCTGATGGTCCAATGCAGTGTGGGCCATTTG ATATAACATACATGTCATGCTTACCAAACATGATTGTTATGGCACCATCTGATGAGGATGAGCTTGTGGACATGGTGGCT ACTGCTGTTCACATTGATGATCGTCCAGTCTGCTTCCGTTATCCAAGGGGTGCCATTATTGGGACAGACCACTATGTGCG CAGTGGAATTCCAATTGAGGTTGGAAAAGGGAAAGTTCTTATAGAGGGTAAAGATGTTGCTTTGCTTGGGTATGGGGCAA TGGTTCAAAACTGCCTCAAAGCTCGGCACCTTCTTTCAAAGCTGGGCATTGAGGTAACTGTTGCTGATGCAAGATTCTGC AAGCCACTTGACATGAAGCTTCTCAGACAACTATGTGAAAACCATGCATTTCTGGTCACAGTTGNNNANGGGTCTGTTGG NNNATTTGGATCCCATGTTGCACAGTTCATGGCACTTGATGGACAGCTTGATGGCAGAGTTAAGTGGAGGCCTATTGTTT TACCAGACAGCTATATCGAACACGCATTGCCAAAGGAACAGCTAACTCTGGCANNGCTGACTGGACACCACATTGCTGCA ACAGTCC

vs DB	Program	Description	Score	E value
NCBI nr	blastx	ref|XP_002514364.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] gb|EEF48318.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]	458	1e-127
Manihot esculenta	blastn	cassava4.1_002567m|PACid:17985757	1380	0.0
FGENESH CDS	blastn	scaffold00847_FGENESH144 10 exon (s) 1178652 - 1184222 2103 bp, chain +	1380	0.0
Arabidopsis thaliana	blastx	AT5G11380.1 | Symbols: DXPS3 | 1-deoxy-D-xylulose 5-phosphate synthase 3 | chr5:3630172-3633250 FORWARD LENGTH=700	389	1e-108
Populus trichocarpa	blastx	POPTR_0006s26580.1|PACid:18211909	446	1e-126
Vitis vinifera	blastx	GSVIVT01035799001|PACid:17840894	406	1e-114
Ricinus communis	blastx	29912.m005583|PACid:16813458	458	1e-129

InterProScan

GO:0003824 Molecular Function catalytic activity

GO:0008152 Biological Process metabolic process

Sequence: DV442880_1_ORF1  Length: 242 aa
InterPro IPR005475 Domain	Transketolase, central region PF02779 Transket_pyr
InterPro IPR005476 Domain	Transketolase, C-terminal PF02780 Transketolase_C
InterPro IPR009014 Domain	Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II SSF52922 TK C-terminal domain-like
InterPro IPR015941 Domain	Transketolase C-terminal-like G3DSA:3.40.50.920 no description
noIPR unintegrated	unintegrated G3DSA:3.40.50.970 no description PTHR11624 DEHYDROGENASE RELATED PTHR11624:SF20 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE seg seg SSF52518 Thiamin diphosphate-binding fold (THDP-binding)

Sequence: DV442880_2_ORF2  Length: 56 aa
noIPR unintegrated	unintegrated seg seg

Sequence: DV442880_2_ORF3  Length: 62 aa
noIPR unintegrated	unintegrated seg seg

Sequence: DV442880_4_ORF2  Length: 84 aa

No hits reported.

Sequence: DV442880_6_ORF2  Length: 81 aa
noIPR unintegrated	unintegrated seg seg

Sequence: DV442880_6_ORF3  Length: 56 aa
noIPR unintegrated	unintegrated seg seg