Home > Keyword search > DV441748

Summary
Sequence ID DV441748
Sequence Length 654 nucleotides
Gbrowse Mes  -
Gbrowse Rco  -
Gbrowse Ptr  -
Gbrowse Vvi  -
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_016063 (DV441748)
 
 
Sequence
>DV441748
TCATGTAATCCACAGGGACGTTAAGCCCAGTAATACTCTCATTGACAAACGCGGTCGTGTTAAAGTTTGTGATTTCGGAA
TATCGGGAGATCTAATAAACTCTATGGCTAAAACAAATATCGGCAGTCAACCATATTTGGCACCAGAACGCATAAATCCA
GATCCCAGTGGATCTGGATACAGTATTCGTTCAGATGTTTGGTCTCTTGGTTTATCGGTGCTTGAATTGGCAATATGCAA
ATTTCCATTTTCGCGATGGAATTCTTTGTTTGACCAATTGAAAGACGTGGTGGCCAGTGATACACCACCAGCACTTCCAA
ATGATTCGACTTATTCGAATACGGTGCGCCATTTTATATCTCAGTGCCTTATCAAAAAGGATAGTGACCGTGCATCGTAT
GATGTACTGATTGAGCATGAGATGCTGACGCCGTTCAAAAATGAGAAATACTTGCAAGAAAGTAAGACCCGGTTTGCTGA
ATATGCAACTGATGTCTTGCTAGGGTAATGGAATTATTTTGATTAGGAACCATCTATGACTCTGACTGTGTTATTATTTT
ATGTATAATGACCATCATTCTTCATTGGTCGTCTTCATTGATCGATCACCCGTGACTATTTGAGAATCAAGTATATATAA
TAAAATATGATTTT

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_972852.1| PREDICTED: similar to licorne CG12244-PA [Tribolium castaneum] gb|EFA08029.1| hypothetical protein TcasGA2_TC005618 [Tribolium castaneum] 165 5e-39
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx  AT4G26070.3 | Symbols: MEK1, NMAPKK, ATMEK1, MKK1 | MAP kinase/ ERK kinase 1 | chr4:13217797-13219695 FORWARD LENGTH=354 121 4e-28
  Populus trichocarpa blastx  POPTR_0018s06810.2|PACid:18214995 110 1e-24
  Vitis vinifera blastx  GSVIVT01015155001|PACid:17825956 110 5e-25
  Ricinus communis blastx  29912.m005366|PACid:16813243 116 1e-26
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: DV441748_2_ORF1  Length: 168 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[2-139]T 2e-37 PD000001 Q8K2U0_MOUSE_Q8K2U0;Q8K2U0_MOUSE_Q8K2U0;
PS50011[1-142]T 27.552 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR002290
Domain
Serine/threonine protein kinase
SM00220[1-142]T 2.2e-06 SM00220 no descriptionno description
InterPro
IPR008271
Active_site
Serine/threonine protein kinase, active site
PS00108[2-14]? NA PS00108 PROTEIN_KINASE_STPROTEIN_KINASE_ST
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[1-167]T 6.2e-33 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[2-142]T 3.2e-30 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[1-151]T 3.7e-29 G3DSA:1.10.510.10 no descriptionno description
PTHR22986[2-167]T 1.5e-59 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF37[2-167]T 1.5e-59 PTHR22986:SF37 MITOGEN ACTIVATED PROTEIN KINASE KINASE 3, MAPKK3, MEK3MITOGEN ACTIVATED PROTEIN KINASE KINASE 3, MAPKK3, MEK3
Sequence: DV441748_4_ORF2  Length: 50 aa
No hits reported.
Sequence: DV441748_4_ORF3  Length: 67 aa
No hits reported.
Sequence: DV441748_5_ORF2  Length: 95 aa
No hits reported.
Sequence: DV441748_6_ORF2  Length: 81 aa
No hits reported.