Sequence ID | ||
Sequence Length | 1080 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_012871 (Contig10777) |
>Contig10777 GTATCCGAGTGCTGTTGACCATTTTAAGAAGCAATTTGCTTACCTTGAGGAACACTATGGAAACGGTGCAACTGTTGCTC CACCTGAGAGGCAGCATGCATCCTTGCCCAGGCCCTGTGTGTTATATTCAGATAATACAGTACAGAACTCAGTGGAAGTC ACAAATGATCTTTCCAAGTGTTCCATCAAAGATATTGAGAAGCCACACGTGGACCGAAGTGGTGGGATCCCAATGACAAG GCTTCCCCTTCAAGTTCCTGAAAGTATTCAAGGTGCTGCAAGGCCTGGGAAAGTTATTGGTTCAGTAATGCGTTATAACA ATTGTGGAGTGGCTGCAAAAGCAGAAGCTCTTGAACAGCGAAGGATGGTCAGGAATCCAGCTATTTCAACTCAATATGCT GCAGCAAACTGTTCATATCCAAGAAGAAATCCAGTGTGTAAAAATGAAAGGGGAGAAGATGATGGGGTTGAAGGCTCCAC TGGGTTGCAGCCGAAGCCTCAATACACAGCAAGGAAAGTAGCTGCAGCTCAAGGTGGAACTGGGAATCACTGGTATTGAT GTTAATGTGGCAAACTTGAATGCTCTGACTGCCTATAACGAGCGTAATAGTGACAGTCATTGAAGCAAATTCAATTGGAC CCATCATGCTGCCAAAGTGAATTCATATGTTTCTAATGCTGTAATTTAGTGGTTTTTTCAACCAGTTCAATTGCATGAGA AGATTTGAGGGATGGACTTCTGTTGGAGGACGTTAGGCAGCAAAATGTAATTGATATCACTAATTTTCAGTTGAACGGGT CCTTTGGTGCTTACCATTCATGACCATATAGCTCTCTGATTTAGCTCAATAAGCCGGAGGGGGATGTATGATAACGTGAA TGAGCAAAGACAAAGGGATGGATTGACATGCCTAGTTAAAATATTCTTTTCAGTTTTCGAAGTTAGAAGTAAGCAACTTC TTTATTGTCCCCTCACTCGGGGCCAAAGCTCAATTGTTGATTGTTGTATCATTCTGCTTTGTTATTTTATACCTGACATA ATGATCTTCTTCATTATGAACAAGTAGCTGCATACATAGC |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002516796.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF45410.1| big map kinase/bmk, putative [Ricinus communis] | 342 | 5e-92 |
Manihot esculenta | blastn | cassava4.1_004681m|PACid:17961744 | 1092 | 0.0 |
FGENESH CDS | blastn | scaffold01551_FGENESH315 10 exon (s) 2063433 - 2067791 1755 bp, chain + | 1092 | 0.0 |
Arabidopsis thaliana | blastx | AT5G19010.1 | Symbols: MPK16 | mitogen-activated protein kinase 16 | chr5:6345096-6347676 REVERSE LENGTH=567 | 209 | 3e-54 |
Populus trichocarpa | blastx | POPTR_0010s03070.2|PACid:18240293 | 337 | 7e-93 |
Vitis vinifera | blastx | GSVIVT01017873001|PACid:17827971 | 319 | 2e-87 |
Ricinus communis | blastx | 29726.m003916|PACid:16806629 | 342 | 1e-94 |
InterProScan |
No hits found |
Sequence: Contig10777_2_ORF1 Length: 185 aa | |
No hits reported. |
Sequence: Contig10777_3_ORF1 Length: 77 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig10777_3_ORF2 Length: 70 aa | |
No hits reported. |
Sequence: Contig10777_3_ORF3 Length: 75 aa | |
No hits reported. |
Sequence: Contig10777_4_ORF2 Length: 64 aa | |
No hits reported. |
Sequence: Contig10777_5_ORF2 Length: 59 aa | |
No hits reported. |
Sequence: Contig10777_5_ORF3 Length: 50 aa | |
No hits reported. |
Sequence: Contig10777_6_ORF2 Length: 93 aa | |||||||
noIPR unintegrated |
|