Sequence ID | ||
Sequence Length | 740 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | Mapped | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_012643 (Contig10398) |
>Contig10398 GAGGCATTAGCAGATCCATATTTTCATGATCTGGCAAATAAAGAGCATGAACCATCAAGACAACCTATTTCAAAGCTTGA GTTTGAATTTGAGAGGAGGAAGTTGACAGAAGATGACGTAAGAGAGTTAATCTATAGAGAGATTTTGGAGTACCATCCTG AGATGCTGAAAGAGTACCTCCGGGGAACAGATCATACTCACTTCGTGTATCCAAGTGGAATTGACCGATTTAAGGAACAA TTTGCACATCTTGAGGAAGGAAATGGTAGAAGTGAAAGAAGCAGTCCTTTGCATAGGAAGCATGCCACCCCCTTGCCTAG GGAGCGGATCTGCACAATCGATGATGAAACTGATATTGTCATAAAGCGTAGTGCAGCATCTTTTACTCGTGCAACTATTC AGAGTCCTCCAAAGTCAGAAACGACTGAAGATCTGCAATCAACTGAAGATCTGCAATCGGCAAACAGAAATGCAGTAGCT ATGCAGACCAGCTCTACCAAGCCGAAGTGTGGCGCCCGTAGCCTGTTGAGGAGCGACAGTATCTGTGCTTCAAGGTGCAT TGGCATGGTTGGAAATGATCGCGAAGTACATGCTCTCTGATTTTTACGTGCACACCATGGAGCGCCCCACAGAAGGGACG TTTACATTTAAAATATATATTTATTCAGCTAGCATACTGCTGAGATAAAGATAGGTACACTCTGCTATTCTCTTTCATGC TAGCTGCTACTGTCTTTCGA |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002526023.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF36363.1| big map kinase/bmk, putative [Ricinus communis] | 340 | 9e-92 |
Manihot esculenta | blastn | cassava4.1_006140m|PACid:17972634 | 1181 | 0.0 |
FGENESH CDS | blastn | scaffold00318_FGENESH46 9 exon (s) 373095 - 378216 1497 bp, chain - | 1181 | 0.0 |
Arabidopsis thaliana | blastx | AT2G01450.4 | Symbols: ATMPK17, MPK17 | MAP kinase 17 | chr2:199722-202010 REVERSE LENGTH=486 | 192 | 2e-49 |
Populus trichocarpa | blastx | POPTR_0008s12890.1|PACid:18247511 | 316 | 1e-86 |
Vitis vinifera | blastx | GSVIVT01008408001|PACid:17821014 | 211 | 3e-55 |
Ricinus communis | blastx | 29816.m000682|PACid:16809594 | 340 | 3e-94 |
InterProScan |
No hits found |
Sequence: Contig10398_1_ORF1 Length: 199 aa | |
No hits reported. |
Sequence: Contig10398_2_ORF2 Length: 64 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig10398_2_ORF3 Length: 52 aa | |
No hits reported. |
Sequence: Contig10398_4_ORF2 Length: 95 aa | |
No hits reported. |
Sequence: Contig10398_5_ORF2 Length: 56 aa | |
No hits reported. |
Sequence: Contig10398_5_ORF3 Length: 54 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig10398_6_ORF2 Length: 80 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig10398_6_ORF3 Length: 66 aa | |||||||
noIPR unintegrated |
|