Summary
| Sequence ID | ||
| Sequence Length | 701 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | - | |
| Gbrowse Ptr | - | |
| Gbrowse Vvi | - | |
| Gbrowse Ath | - | |
| Corresponding scaffold | - | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_012403 (Contig10042) |
| >Contig10042 CCATTGNNNTGGGATAATTAGGGAGGCCTTCCCATACACTTCTGATGGAAGCCGCACGTTGCCAGTGTTAGATCTCCATT CCAATAGAACGAGTTTAACTTTGTCTGATGGAGATTACGCAATGAAGCATGTGGTCACTAATGCCAGAGGATTGAAGAAC ACGAGGGATGATTCAAGAATGATCACATCGTTACCTGTATCCCCTTGTTCTAGCCCTTTACGGCAATATGGACCAGCACA CAAGAGTTGTTTCCTTTCACCTTCTCATCCGACATTTGCATTGGCTGGGCAAAGCGGTTACAACTTAAGTGATTACTCGT TGTATTCAACGAGACCAAACGTAACAAATGCTCACGATACTTGCTTGGAAACTTCCCTATTAAGAAGTCAAACACCTGGA GCATCACCAAGAACAAGACCCATTTGAGTCTAAATACCAGCACCCAACACTATTCATAATCTGCTCTGGATGGAATCACA AGGTTCTAATATCCATGGTTCCTTGCTCTTAGTATGGTAAATGGTTTTTTCACTTGAATGGAAGAGTGAAGTTGGTGAAT TCTTTTCCCGGAGGCAAGGGGAGAGACATTCGGGGCGTGGGGTAGATAGATGGTGGATTTATCGATATGGCAGTCTCTTG GCGATGGTTGTAAATGTCCGGTGGGTCATCACCGTGTGTAACATTCATGTGGTAATCCAGT |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ef|XP_002309908.1| predicted protein [Populus trichocarpa] >gi|... 181 7e-44 >ref|XP_002309908.1| predicted protein [Populus trichocarpa] gb|EEE90358.1| predicted protein [Populus trichocarpa] | 181 | 7e-44 |
| Manihot esculenta | blastn | cassava4.1_003326m|PACid:17963477 | 821 | 0.0 |
| FGENESH CDS | blastn | scaffold12795_FGENESH4 4 exon (s) 27201 - 28693 705 bp, chain + | 821 | 0.0 |
| Arabidopsis thaliana | blastx | AT1G53570.3 | Symbols: MAP3KA, MAPKKK3 | mitogen-activated protein kinase kinase kinase 3 | chr1:19987391-19990733 FORWARD LENGTH=608 | 97.4 | 8e-21 |
| Populus trichocarpa | blastx | POPTR_0007s04070.1|PACid:18243224 | 181 | 4e-46 |
| Vitis vinifera | blastx | GSVIVT01026487001|PACid:17834182 | 174 | 3e-44 |
| Ricinus communis | blastx | 29691.m000286|PACid:16805903 | 78.2 | 3e-15 |
| InterProScan |
| No hits found |
| Sequence: Contig10042_2_ORF1 Length: 141 aa | |
| No hits reported. | |
| Sequence: Contig10042_2_ORF2 Length: 60 aa | |
| No hits reported. | |
| Sequence: Contig10042_4_ORF2 Length: 54 aa | |
| No hits reported. | |
| Sequence: Contig10042_5_ORF1 Length: 56 aa | |
| No hits reported. | |
| Sequence: Contig10042_6_ORF2 Length: 59 aa | |
| No hits reported. | |
| Sequence: Contig10042_6_ORF3 Length: 79 aa | |
| No hits reported. | |
