Sequence ID |
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Sequence Length | 682 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | - | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold07225 | |
Probe ID of RIKEN ver.1 microarray | - |
>Contig09881 TTGCGTGAGGTTAAAATCATGAAGCGTTTGCGGCATCCAAACATTGTTCTCTTTATGGGTGCTGTTACTCAGCCTCCTAG TTTGTCCATAGTCACAGAGTACTTATCAAGGGGTAGCTTGCATAAACTTCAGCATATGCCTGATGTTGGATTAATACTGG ACGAGAAACGTCGCTTAAATATGGCATATGATGTGGCAAAGGGTATGAATTATCTTCATCAGCTTAGACCTCCTATTGTT CATCGAGATTTAAAGTCTCTAAACCTCTTAGTGGACAGTACATACACAGTAAAGGTTGTAGCAGCTGTCGGTTTCAAGGG TGAGAAACTTGAAGTTCCAACTTATGTAAATCCTTCAGTGGCTGCCCTAATTGATATCTGCTTGACTAGCGAGCCCTCAA AGCGTCCATCGTTCTCGTATATCATGGAAACTTTACAAAAATTGATAAACAACTCTATTTCTCAATCACCTAATGTACAT GTTCGGTGACAAATCTGTGGAGTGCAACCCCAGTAAATTATTTATTCTTAGACATGATCATCTGGTTTATCTTTCAGGTG CGCCTGTCTTTGTATAAATAGATGTGAAATTGAATCATTTTTGCCGGCATCTATGGCTTTCATGTCTGGCAATTTGCTGC CAGAGCCTCGTGTATCTGATATCTCAATATGCATTTATGTCT |
vs DB | Program | Description | Score | |
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NCBI nr | blastx | ref|XP_002530885.1| map3k delta-1 protein kinase, putative [Ricinus communis] gb|EEF31491.1| map3k delta-1 protein kinase, putative [Ricinus communis] | 186 | 2e-45 |
Manihot esculenta | blastn | cassava4.1_003345m|PACid:17978355 | 954 | 0.0 |
FGENESH CDS | blastn | scaffold04116_FGENESH9 14 exon (s) 123695 - 130076 2058 bp, chain - | 567 | 1e-161 |
Arabidopsis thaliana | blastx | AT5G03730.1 | Symbols: CTR1, SIS1, AtCTR1 | Protein kinase superfamily protein | chr5:974958-979660 REVERSE LENGTH=821 | 158 | 3e-39 |
Populus trichocarpa | blastx | POPTR_0008s02600.1|PACid:18249674 | 177 | 8e-45 |
Vitis vinifera | blastx | GSVIVT01034710001|PACid:17840095 | 174 | 3e-44 |
Ricinus communis | blastx | 29428.m000323|PACid:16802839 | 186 | 8e-48 |
InterProScan |
No hits found |
Sequence: Contig09881_1_ORF1 Length: 162 aa | ||||||||||||||||
InterPro IPR000719 Domain |
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InterPro IPR001245 Domain |
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InterPro IPR002290 Domain |
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InterPro IPR008271 Active_site |
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InterPro IPR011009 Domain |
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noIPR unintegrated |
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