Sequence ID | ||
Sequence Length | 763 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | - | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_012025 (Contig09495) |
>Contig09495 CTCTCGCAAGTATTATCAAAATGAGTTCCAGTGGCAACTCTCCCTACACTGTTACTGTCGAAAATACTATAATGCTCCAG TCCAGTGAGGACCAGCTGACGAACTTTTTCACGCAGGCTGCAGAACTCCTCCCCAAGTATTTGCCCAATATATACAAGAA GATCACGCCATGCCAGTCGAGCAAGGGTGTATATACATTTAAAATCGAGTATGCTAATGGATGTCCAATCGAGACAGAGA CAGACCAGATTGATAAACTGGATCTTGAAAAACTGCAATGCTTTTACTCTGTAATTGATGGAGATGTGCTGAAGTATTAC AAGAATCTCAAAGTCACTGTTACTTTGTATCCTCAAGAGAAAGGTTGCAAGGTGAAAAGGGCGTATGAGTATGAGAAGGT AGATAACAGCTTTGCTCCAGCATTCTTCGAGTTCGAAATCGCTGTCCTCATTCAGGTGGATCAAGTGATTCAAAATGCTC CTACCAAAAAATACTGAGGCATATGTTGCCTCACGTGCAGCATGCATGGAATATTAGATAGTAAATAAAACTCATCTCCC AGGATACTTGGAGATGCTGTCCCATGCAAGCTGTTATCGTATGAATATGGTAAATAAAGTGGACTACTGCTCCACCCTGC ACTTGTAATACGCAAGTGCATGTTGTATTTGGTTGTCGTTTGTATCATGTTTGCAAATGGAGATGGGTTACCTGTCTCCT AGCTTTGTAAAATATTTGGTGTTTTATGGTATTATGTTTTCTT |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | gb|ACU14434.1| unknown [Glycine max] | 68.9 | 7e-10 |
Manihot esculenta | blastn | cassava4.1_018111m|PACid:17967699 | 938 | 0.0 |
FGENESH CDS | blastn | scaffold06011_FGENESH18 2 exon (s) 151314 - 151872 477 bp, chain - | 938 | 0.0 |
Arabidopsis thaliana | blastx | AT1G24020.2 | Symbols: MLP423 | MLP-like protein 423 | chr1:8500653-8501458 REVERSE LENGTH=155 | 57.8 | 8e-09 |
Populus trichocarpa | blastx | POPTR_0010s10600.1|PACid:18240309 | 62.4 | 4e-10 |
Vitis vinifera | blastx | GSVIVT01020183001|PACid:17829649 | 59.7 | 1e-09 |
Ricinus communis | blastx | 29168.m000373|PACid:16802389 | 66.6 | 1e-11 |
InterProScan |
GO:0006952
Biological Process defense response |
GO:0009607
Biological Process response to biotic stimulus |
Sequence: Contig09495_1_ORF2 Length: 64 aa | |
No hits reported. |
Sequence: Contig09495_3_ORF1 Length: 164 aa | ||||||||||
InterPro IPR000916 Family |
| |||||||||
noIPR unintegrated |
|
Sequence: Contig09495_4_ORF2 Length: 57 aa | |
No hits reported. |
Sequence: Contig09495_5_ORF2 Length: 82 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig09495_5_ORF3 Length: 79 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig09495_6_ORF2 Length: 120 aa | |
No hits reported. |