Summary
| Sequence ID | ||
| Sequence Length | 682 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | - | |
| Gbrowse Ptr | - | |
| Gbrowse Vvi | - | |
| Gbrowse Ath | - | |
| Corresponding scaffold | - | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_011832 (Contig09214) |
| >Contig09214 CCAGAANNTCTGTATCTTTCTTTTTTCAAAAGCTAAAAATGACACTATGGGNGCAAACTAGAGGCACAGTTTGGGATCGA TGCTCCTGCAGATCAGTTTCATGATGTCTTGAGTTGTCGACCACACCATATATCCAATATGTCCCACAATATTCATGGTT GTGATCTTCATGAAGGTGAATGGGGTAAGGAAGGCGCTATTGTCTGCTGGAAATATTTCCATGATGGGTCTGCTAAAGTG GCTAAGGAAGTAATTGAAATCATAGATGATGTGAATTTGTTAACCGTCTTCAAAGCGATCGAAGGAGATTTGTTGGAAGA ATTTAAGAATTTCAAGTTGACCGTTCAAGTTACGCCTAAAGGAGAGGGCAGTGTGGTGCGTTGGACCTTAGAATATGAGA AGATCCATGAGAATATACCAGATCCTTACTCCTTCCTAGAGATTATTGTCCAAAATAGTAAGGATGTTTCTGCTCATCTC GTGAAATGTCAGAAGAAATGATCATGGAACATGTTATGCTCTAATATGTGGTTTGCATAATAATTAAATAAGTGCTTTAT AATGAAGCACCAATGACAATGCATCTTTGCATATAAACTTGTATCTATAGGACAATGCATCTTTGCATATGAACTTGTAT CTATAATGCATATGAACTTGTATCAGTAACGTTTTAAACCTT |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ref|XP_002534267.1| Major latex protein, putative [Ricinus communis] gb|EEF28116.1| Major latex protein, putative [Ricinus communis] | 183 | 2e-44 |
| Manihot esculenta | blastn | cassava4.1_018267m|PACid:17989448 | 839 | 0.0 |
| FGENESH CDS | blastn | scaffold09354_FGENESH16 2 exon (s) 131619 - 132152 456 bp, chain - | 682 | 0.0 |
| Arabidopsis thaliana | blastx | AT1G70830.5 | Symbols: MLP28 | MLP-like protein 28 | chr1:26710203-26711395 REVERSE LENGTH=173 | 158 | 3e-39 |
| Populus trichocarpa | blastx | POPTR_0010s12110.1|PACid:18241894 | 182 | 2e-46 |
| Vitis vinifera | blastx | GSVIVT01011718001|PACid:17823514 | 147 | 4e-36 |
| Ricinus communis | blastx | 29947.m000052|PACid:16814350 | 183 | 5e-47 |
| InterProScan |
| GO:0006952
Biological Process defense response |
| GO:0009607
Biological Process response to biotic stimulus |
| Sequence: Contig09214_1_ORF2 Length: 152 aa | ||||||||||
| InterPro IPR000916 Family |
| |||||||||
| noIPR unintegrated |
| |||||||||
![[65-145]T 1e-09 PD000531 Q8L9L8_ARATH_Q8L9L8;](http://pmix.psc.riken.jp/img/interpro/D.gif){kind=small}
![[4-149]T 4e-59 PF00407 Bet_v_I](http://pmix.psc.riken.jp/img/interpro/H.gif){kind=small}
![[5-151]T 4.3e-33 G3DSA:3.30.530.20 no description](http://pmix.psc.riken.jp/img/interpro/X2.gif){kind=small}
![[2-148]T 1.2e-37 SSF55961 Bet v1-like](http://pmix.psc.riken.jp/img/interpro/B.gif){kind=small}
| Sequence: Contig09214_4_ORF2 Length: 73 aa | |
| No hits reported. | |
| Sequence: Contig09214_5_ORF2 Length: 56 aa | |
| No hits reported. | |
| Sequence: Contig09214_6_ORF2 Length: 57 aa | |
| No hits reported. | |
| Sequence: Contig09214_6_ORF3 Length: 58 aa | |
| No hits reported. | |
