Summary
| Sequence ID | ||
| Sequence Length | 815 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | - | |
| Gbrowse Ptr | Mapped | |
| Gbrowse Vvi | - | |
| Gbrowse Ath | - | |
| Transcript scaffold composed of the full-length cDNA(s) | Scaffold08192 | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_006309 (Scaffold08192) |
| >Contig08561 CCGCAAAACTAGCACTGGGAAGCAAGAGTAATCAGCCGCGGAGAACCTGCACACATCAGAAAAGCAAGTCCAGCAGTGTG GCATAGCTACCAAATATGCGCCAGATATGGCTGTCAACATCGACTCCAACCCTTTCTTTCTGAACCGGGCAGGAGTGAAT AAGGTGGAATAAGCTGATGACCGAATTAAAATCAATACAAACTCGTTGCACGCCAAGGCCCAGTACGATGGGATCAGCAC TGCTTCTCACGGAAAAGATGGTAGGTTCAGTATGGTACGACGAGGATGTACTAAAGCAGTGAAAGGTCTTGTGCTGAATG GACGGATCTATGTACAGTAAGCATGGAGCGATGGAGAGCCTGTTAGGCACTAGGTCTGATCATGAGAACTATGTATTAGA TTGAGCTGTAAAAAAGACCTCAAGTGTATTGCGGTAAAATTCCATGTGAGGACATCATTATAAGATAAATTCACGAAGAA AGCAAGCGTTGCTTCTCTTTCCTCATCGCTGTATCAATGCAATTGTGGATCCTTCTAGTTACTATCTTGGGGAGATCGCT CAATATGGTTGCTTTACGCCCTTTCTGTTTCCTGCCTTGCTCCGATGTCTAATGAGATGGAACCGGTCGCTTCTTACATT GCCCAGACTGTATTTGTGGGAATATGGAATCTAGTGAGAGAAGAGAGAGGGAACAGAAAATAAAGATCTCAGGTCCTTTA AATTTTCAGTGCTGGAATATGGTTTTTCCCTTTTTTTTTTCCTTCAAAAAAGAAGATGTTGAACATTTCCAATGGATGTT GAATTTGAGTGAGCT |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ef|XP_002300882.1| predicted protein [Populus trichocarpa] >gi|... 105 6e-21 >ref|XP_002300882.1| predicted protein [Populus trichocarpa] gb|EEE80155.1| predicted protein [Populus trichocarpa] | 105 | 6e-21 |
| Manihot esculenta | blastn | - | - | - |
| FGENESH CDS | blastn | - | - | - |
| Arabidopsis thaliana | blastx | AT2G42880.1 | Symbols: ATMPK20, MPK20 | MAP kinase 20 | chr2:17840572-17843947 REVERSE LENGTH=606 | 61.2 | 8e-10 |
| Populus trichocarpa | blastx | POPTR_0002s06080.1|PACid:18244319 | 105 | 3e-23 |
| Vitis vinifera | blastx | GSVIVT01000784001|PACid:17817158 | 59.7 | 2e-09 |
| Ricinus communis | blastx | 29682.m000597|PACid:16805689 | 94.0 | 7e-20 |
| InterProScan |
| No hits found |
| Sequence: Contig08561_1_ORF2 Length: 67 aa | |
| No hits reported. | |
| Sequence: Contig08561_2_ORF2 Length: 55 aa | |
| No hits reported. | |
| Sequence: Contig08561_2_ORF3 Length: 54 aa | |
| No hits reported. | |
| Sequence: Contig08561_3_ORF2 Length: 74 aa | |
| No hits reported. | |
| Sequence: Contig08561_4_ORF2 Length: 82 aa | |
| No hits reported. | |
| Sequence: Contig08561_5_ORF2 Length: 107 aa | |
| No hits reported. | |
