Sequence ID | ||
Sequence Length | 647 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_011253 (Contig08377) |
>Contig08377 TGCGAGGTCTACAATCAGTAGAGACTCCAGTTGGANNTCCGGCCGACGTCGTTTGGGATGCTTATCGTGGTCTTGAGCTG GGAAGGCTCGTCGATCAACTTCTGCCTGACGTTATTGGCAAAGTAGAGGTTGTGCAAGGTGATGGAGGCGTCGGTACTAT CGTCAAACTTACATTTCCTGCTGGAACTCCTGGAGTAGGTTACCTGAAGGAAATATTTACAAAGATTGATGATGATGATC GTGTGAAGGAAACAGAAATCATAGAAGGAGGTTACAAAGATCTTGGCTTTGATCTTTTTCGTTGTCGCTTGGAGATCATT GAGAAGGATGCTGAATCAAGTATCATCAGATCCACATTAGAGTATGAGATAGATGACACCAAACCTGAACTTGCATCTTT AGTCTCCACCAAACAATTTGAGATTATGGCAGAAACTGTTGGGAAATATCTGGCTGACAAGAAATCCATCTCATAGACAC AGAGTCCATACTCTTCTGATGCATTTTCCCTACTTCTCATGACAAAGTAGGCAACGATATGTATTCAGAAATAAATTAAT AATACTTCAAAGTTCTGCAGCGAATGCTCTGTTAAGCTAGCACATTGTTCTGTCTCAACGTTCAATAAAGTCATCAATTT TCATCAA |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002520059.1| conserved hypothetical protein [Ricinus communis] gb|EEF42383.1| conserved hypothetical protein [Ricinus communis] | 251 | 6e-65 |
Manihot esculenta | blastn | cassava4.1_018106m|PACid:17965574 | 932 | 0.0 |
FGENESH CDS | blastn | scaffold03614_FGENESH122 3 exon (s) 992757 - 994221 552 bp, chain - | 581 | 1e-165 |
Arabidopsis thaliana | blastx | - | - | - |
Populus trichocarpa | blastx | POPTR_0003s08640.1|PACid:18217411 | 206 | 2e-53 |
Vitis vinifera | blastx | GSVIVT01024369001|PACid:17832585 | 133 | 8e-32 |
Ricinus communis | blastx | 30073.m002283|PACid:16816866 | 251 | 2e-67 |
InterProScan |
GO:0006952
Biological Process defense response |
GO:0009607
Biological Process response to biotic stimulus |
Sequence: Contig08377_3_ORF1 Length: 157 aa | ||||||||||
InterPro IPR000916 Family |
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noIPR unintegrated |
|
Sequence: Contig08377_5_ORF1 Length: 90 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig08377_6_ORF2 Length: 106 aa | |
No hits reported. |